Pairwise Alignments

Query, 702 a.a., chemotaxis protein CheA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 675 a.a., chemotaxis protein CheA from Dickeya dianthicola 67-19

 Score =  509 bits (1310), Expect = e-148
 Identities = 303/701 (43%), Positives = 425/701 (60%), Gaps = 49/701 (6%)

Query: 5   MAEFHQVFFEESHEHLENMEQLLIAINLQSPDPEELNTIFRAAHSIKGGSGIFGFTALSS 64
           M+ F+Q FF+E+ E L +MEQ L+ ++  +PD E++N IFRAAHSIKGG+G FGF  L  
Sbjct: 1   MSAFYQTFFDEADELLADMEQHLLQLDPLAPDTEQMNAIFRAAHSIKGGAGTFGFRVLQE 60

Query: 65  VTHVMENLLDKVRKGTFELSSGIIDLLLKTVDTLSHILSLYREEEPIDWQQVEFAKNQLV 124
            TH++ENLLD  R+G   LS+ II+L L+T D +   L  Y+  +  + +  E+    + 
Sbjct: 61  TTHILENLLDGARRGEMRLSTDIINLFLETKDIMQDQLDAYKTSQEPNAESFEY----IC 116

Query: 125 AALNGDPFLTTSPEAIPATPTKTEITQTAVVVSDASHQDDIGF--------GFFEDDVEL 176
            AL      +   +A  A   K +  Q   V S A+     G         G  E D+  
Sbjct: 117 QALRQLALESKENDAAGAASAKVDAGQP--VSSSAAPAPAGGHSGLRIALTGLKESDIPQ 174

Query: 177 TLAIENQDFGFFDEAFTAKEISVEDINKTLLDSQLVTNTEPDDDLGFGFFESLTPESVDS 236
            L  E  + G      T KE +V+  N   L  +    +  +DD+       L P+ ++ 
Sbjct: 175 LLE-ELGNLG------TVKE-TVQTSNSVELTLE---TSASEDDISAVLCFVLEPDQIN- 222

Query: 237 EINALVHIQANKAIAAIEPLSKPVNSPSVPKIPRYTGNTAESTKVAPADPVDPSPVLNKS 296
                            +  ++ V + +VP +       AE  + APA PV P  V   +
Sbjct: 223 ----------------FKSAAEAVPADAVPPVVAQ----AEQAEPAPAAPVQP--VAPVA 260

Query: 297 VASGTKSTPTAATKKGNTSTQDATLRVETSKIDTLVNLAGELVITQSMLTLIGNEISGEL 356
            A   K        KG   T D ++RV   K+D L+NL GELVITQSML    + +    
Sbjct: 261 AAPAAKPAGGNDAAKGRQKTGDTSIRVAVEKVDQLINLVGELVITQSMLAQRSSALDPVA 320

Query: 357 GERLKTALVELERNTREMQEAVMSVRMLPVSFVFNRFHRLVRDLSDQLGKNVNLVIEGGN 416
              L  ++ +LERN R++QE+VMS+RM+P+ +VF+RF RLVRDL+ +LGK V L   G +
Sbjct: 321 HGDLLNSMGQLERNARDLQESVMSIRMMPMEYVFSRFPRLVRDLAAKLGKEVELTQLGSS 380

Query: 417 TEIDKGMIEKLVDPLTHLVRNSLDHGIEKPEVRRLLGKAEIAQLSLRASQRGGNIVIAVH 476
           TE+DK +IE+++DPLTHLVRNSLDHGIE PE R   GK+ +  L+L A  +GGNI I V 
Sbjct: 381 TELDKSLIERIIDPLTHLVRNSLDHGIESPETRIESGKSAVGNLTLSAEHQGGNICIEVI 440

Query: 477 DDGAGLHREKILQKARENNMSVTDNMPDKQIWQLIFAAGFSTAKEITDVSGRGVGMDVVR 536
           DDGAGL+RE+IL KA    M+V ++M D+ +  LIFA GFSTA+++TDVSGRGVGMDVV+
Sbjct: 441 DDGAGLNRERILAKALSQGMAVNESMSDEDVGMLIFAPGFSTAEKVTDVSGRGVGMDVVK 500

Query: 537 RNIEALGGRIDIDSVAGQGATFEIQLPLTLAIVDGMSVSVGKQIYILPLVHIIESIQPHT 596
           RNI+ +GG ++I  V G+G T  I LPLTLAI+DGMSV V  +++ILPL  ++ES+QP  
Sbjct: 501 RNIQEMGGHVEIHFVKGKGTTIRILLPLTLAILDGMSVKVNNEVFILPLNAVMESLQPQA 560

Query: 597 EQLKYLA-QERLIRVREEYLPLLNLHQLMEITPFAKCPEEGIVVLLESNNKRFGLCVDAL 655
           E L  LA  ER+++VR EYLPL+ L+Q+ ++        +GIVV+L+S  +R+ L VD L
Sbjct: 561 EDLYPLAGGERVLQVRGEYLPLIELYQVFDVAGAKTDATQGIVVILQSAGRRYALLVDQL 620

Query: 656 VGQQQVVIKSLEKHYRRIPGVSGATIMGDGSVALILDVESL 696
           +GQ QVV+K+LE +YR++PGVS ATI+GDGSVALI+DV +L
Sbjct: 621 IGQHQVVVKNLESNYRKVPGVSAATILGDGSVALIVDVSAL 661