Pairwise Alignments

Query, 378 a.a., quinone-reactive Ni/Fe hydrogenase, small subunit precursor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 368 a.a., Uptake hydrogenase small subunit from Xanthobacter sp. DMC5

 Score =  315 bits (807), Expect = 1e-90
 Identities = 160/346 (46%), Positives = 218/346 (63%), Gaps = 4/346 (1%)

Query: 27  QTLLEKLQQHGISRRDFMKWSAMVTGMLALPLPFSNLVAEAAELADRVPLIWLHMAECTG 86
           +T  E +++ GI+RR F+K+ ++    L L   F+  +A A E   R P++WLH  ECT 
Sbjct: 4   ETFYEVMRRQGITRRSFLKYCSLTAAALGLGPEFAPQIAMAMETKPRTPVLWLHGLECTC 63

Query: 87  CSESLVRADTPNLDSLIFDHISLEYHETLMAAAGWQAEENLEHALETYKGRYLLAVEGAI 146
           CSES +R+  P +  ++   ISL+Y +TLMA+AG QAE  L+  +  YKG Y+LAVEG  
Sbjct: 64  CSESFIRSAHPLVKDVVLSMISLDYDDTLMASAGHQAEAILDEVMTKYKGNYILAVEGNP 123

Query: 147 PTANNGSFLTVGCKGHTGLEIVKHAAEGAAAIISVGTCAAFGGVQAAYPNPTGAKGVHEV 206
           P   +G +  +G  G   ++ +K  A+ A AIIS G+CA++G VQAA PNPT A  VHEV
Sbjct: 124 PLNEDGMYCIIG--GKPFVDQLKKVAKDAKAIISWGSCASYGCVQAARPNPTRATPVHEV 181

Query: 207 V-SKPVINLGGCPPSEKNIVGTLMYFIMFGKLPALDMFNRPKWAYGARVHDNCERRGRFD 265
           +  KP+I + GCPP  + + G + Y + F +LPALD   RP   Y  R+HD C RR  FD
Sbjct: 182 IFDKPIIKVPGCPPIAEVMTGVITYMLTFDQLPALDRQGRPLMFYSQRIHDKCYRRPHFD 241

Query: 266 AGEFVEEFGDHGAKEGYCLYKVGCKGPYTYNNCPTERFNHHTSWPVLAGHGCMGCSEPNF 325
           AG++VE F D GA++GYCLYKVGCKGP TYN C T R+N   S+P+ AGHGC+GCSE  F
Sbjct: 242 AGQYVESFDDEGARKGYCLYKVGCKGPTTYNACSTVRWNDGVSFPIQAGHGCIGCSEDGF 301

Query: 326 WDDMADFEKPLG-RQLLHGLDATADTVGAVILGATVVGIGAHAVAS 370
           WD  + + +    +    G++A AD VG V  GA   G+ AHA  S
Sbjct: 302 WDKGSWYARLADLKGSGFGVEANADQVGLVAAGAVGAGVAAHAAIS 347