Pairwise Alignments

Query, 400 a.a., ISSod4, transposase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 401 a.a., ISSod5, transposase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  600 bits (1548), Expect = e-176
 Identities = 289/401 (72%), Positives = 346/401 (86%), Gaps = 1/401 (0%)

Query: 1   MTQP-FNFEQALKDLQSGKSLTGKDSILGPLIKQLTEAALQAELEQHLAHDPQPNRKNGK 59
           MT P F+   A++ L+ GK LTGKD IL PLIKQLTEAAL AEL+ HLA     NRKNGK
Sbjct: 1   MTTPTFDINAAIQALREGKDLTGKDGILTPLIKQLTEAALAAELDGHLASTEGANRKNGK 60

Query: 60  TPKTIKHPSGNFELDAPRDRNGTFEPQLIKKNQTTLTDEIERKVLSMFSIGMSYRDINQH 119
           T KT+K P GNFEL+ PRDR GTFEPQL+KK+QT LTDE+ERK++ +FS+G SY+DI  H
Sbjct: 61  TTKTVKSPLGNFELNTPRDRAGTFEPQLVKKHQTQLTDEMERKIIGLFSLGSSYQDIRAH 120

Query: 120 VEDMYGLNVSNATVSAITDKLIPELKAWQQRPLDSHYPIVWLDAIHYKVKEDGRYVSKAV 179
           +EDMYG++VSN TV+AITDKL+PEL+AW++R L+  YP++WLDAIHYK+KE+GR++SKAV
Sbjct: 121 IEDMYGMSVSNGTVNAITDKLLPELQAWRERELEPLYPVIWLDAIHYKIKENGRFISKAV 180

Query: 180 YTLLALNMKGKKEILGLHLSENEGANYWLSVLTDLNNRGVKDILIACVDGLTGFPEAIAS 239
           YT+LALN++GKKE+LGL+LS+NEGA++WLSVLTDL NRGVKDILIACVDGL GFPEAIA+
Sbjct: 181 YTILALNVEGKKELLGLYLSDNEGAHHWLSVLTDLYNRGVKDILIACVDGLKGFPEAIAT 240

Query: 240 IFPHTETQLCVIHQIRNSMKYVASKNQKAFMADLKPVYRAVSKEAAEMALDELEAKWGDA 299
           I+P TE QLCVIHQIRNSMKYVASK+QKAFMADLK VY+A +  AAEMALDELE KWGD 
Sbjct: 241 IYPQTEVQLCVIHQIRNSMKYVASKHQKAFMADLKCVYKAATLNAAEMALDELETKWGDK 300

Query: 300 YPLVINSWRRKWHNLSHYFKYPEHIRKVIYTTNAVEAVHRQFRKLTKTKGAFPNENSLLK 359
           YP+VI SWR KW  LS YFKYP+++R  IYTTNAVEAVHRQFRKLTKTKG F NENSLLK
Sbjct: 301 YPVVIKSWRNKWALLSVYFKYPDYVRTAIYTTNAVEAVHRQFRKLTKTKGGFANENSLLK 360

Query: 360 LLYAGILNASDKWTMPIHNWSLCLSQLAIYFEGRLDSVLEI 400
           LLYAGIL AS++WT PI NW+L LSQL+I+FEGRL++ +++
Sbjct: 361 LLYAGILKASERWTHPIQNWNLTLSQLSIHFEGRLENHIDL 401