Pairwise Alignments

Query, 400 a.a., ISSod4, transposase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 400 a.a., IS256 family transposase from Dickeya dianthicola ME23

 Score =  638 bits (1646), Expect = 0.0
 Identities = 303/400 (75%), Positives = 357/400 (89%)

Query: 1   MTQPFNFEQALKDLQSGKSLTGKDSILGPLIKQLTEAALQAELEQHLAHDPQPNRKNGKT 60
           M+QPF+F++ALK LQSG++LTGKD IL PLIKQLTEAAL AEL+ HLA D + NRKNG  
Sbjct: 1   MSQPFDFDKALKALQSGQALTGKDGILTPLIKQLTEAALSAELDSHLAQDVEANRKNGSG 60

Query: 61  PKTIKHPSGNFELDAPRDRNGTFEPQLIKKNQTTLTDEIERKVLSMFSIGMSYRDINQHV 120
            KTIK P+GNFEL  PRDRNGTFEPQL+KK+QTTL+DEIE K++ +F++GMSY+DI++ +
Sbjct: 61  KKTIKAPTGNFELATPRDRNGTFEPQLVKKHQTTLSDEIEHKIIRLFALGMSYQDISREI 120

Query: 121 EDMYGLNVSNATVSAITDKLIPELKAWQQRPLDSHYPIVWLDAIHYKVKEDGRYVSKAVY 180
           ED+Y  +VS AT+SA+TDK+IPELK WQQRPL+  YP VWLDAIHYK++EDGRY SKAVY
Sbjct: 121 EDLYAFSVSTATISAVTDKVIPELKQWQQRPLEQVYPFVWLDAIHYKIREDGRYQSKAVY 180

Query: 181 TLLALNMKGKKEILGLHLSENEGANYWLSVLTDLNNRGVKDILIACVDGLTGFPEAIASI 240
           T+LALN++GKKE+LGL+LSE+EGAN+WLSVL+DL NRGVKDILIACVDGLTGFPEAI SI
Sbjct: 181 TVLALNLEGKKEVLGLYLSESEGANFWLSVLSDLQNRGVKDILIACVDGLTGFPEAINSI 240

Query: 241 FPHTETQLCVIHQIRNSMKYVASKNQKAFMADLKPVYRAVSKEAAEMALDELEAKWGDAY 300
           +P TE QLCVIHQIRNS+KYVASK+ KAFM DLKPVYRAVSKEAAEMALDELEAKWG  Y
Sbjct: 241 YPQTEVQLCVIHQIRNSIKYVASKHHKAFMTDLKPVYRAVSKEAAEMALDELEAKWGQQY 300

Query: 301 PLVINSWRRKWHNLSHYFKYPEHIRKVIYTTNAVEAVHRQFRKLTKTKGAFPNENSLLKL 360
           P+V+ SWRRKW NLS YF+YP +IRKVIYTTNA+E+VHRQFRKLTKTKGAFPNENSLLKL
Sbjct: 301 PVVLQSWRRKWDNLSAYFRYPANIRKVIYTTNAIESVHRQFRKLTKTKGAFPNENSLLKL 360

Query: 361 LYAGILNASDKWTMPIHNWSLCLSQLAIYFEGRLDSVLEI 400
           LY G++NA  KWTMPI +W+L LSQLAIYFEGRL++V+ +
Sbjct: 361 LYLGLMNAQGKWTMPIQSWNLTLSQLAIYFEGRLNNVMTL 400