Pairwise Alignments

Query, 257 a.a., hisF protein (cyclase) (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 245 a.a., 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) from Pseudomonas putida KT2440

 Score = 63.9 bits (154), Expect = 3e-15
 Identities = 50/249 (20%), Positives = 111/249 (44%), Gaps = 19/249 (7%)

Query: 6   IVPCLDVKDGCVVKGVQFRNHEIV---GDIVPLAARYAAEGADELVFYDITASAHDRVVD 62
           I+P +D+KDG  V+  Q R  +      D V +AA++   G   L   D+  +   + V+
Sbjct: 3   IIPAIDLKDGACVRLRQGRMEDSTVFSDDPVSMAAKWVEGGCRRLHLVDLNGAFEGQPVN 62

Query: 63  KSWVSRVAEQI-DIPFCVAGGIKTITQARELLAFGADKISVNSPALSDPSLISRLQDEFG 121
              V+ +A++  ++P  + GGI+++      +  G   + + + A+  P  ++     F 
Sbjct: 63  GEVVTAIAKRYPNLPIQIGGGIRSLETIEHYVKAGVSYVIIGTKAVKQPEFVAEACKAFP 122

Query: 122 RQCIVIGIDSFYDAASDSYKVKQFTGDEAATKETAWYTQDWVEEVQKRGCGEIVLNVMNQ 181
            + +++G+D     A D      F   +   + ++    D  +  +  G   IV   + +
Sbjct: 123 GK-VIVGLD-----AKDG-----FVATDGWAEVSSVQVIDLAKRFEADGVSAIVYTDIAK 171

Query: 182 DGVRGGYDIKQLSLVRQLCDVPLIASGGAGTMAHFRDVFIDAK---VDAALAASVFHKAI 238
           DG+  G ++     + +   +P+IASGG   +   +   +DAK   +  A+     ++  
Sbjct: 172 DGMMQGCNVPFTKALAEATRIPVIASGGIHNLGDIK-ALLDAKAPGIIGAITGRAIYEGT 230

Query: 239 INIGELKQY 247
           +++ E + +
Sbjct: 231 LDVAEAQAF 239



 Score = 37.0 bits (84), Expect = 4e-07
 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 2/89 (2%)

Query: 5   RIVPCLDVKDGCVVKGVQFRNHEIVGDIVPLAARYAAEGADELVFYDITASAHDRVVDKS 64
           +++  LD KDG V          +   ++ LA R+ A+G   +V+ DI      +  +  
Sbjct: 124 KVIVGLDAKDGFVATDGWAEVSSV--QVIDLAKRFEADGVSAIVYTDIAKDGMMQGCNVP 181

Query: 65  WVSRVAEQIDIPFCVAGGIKTITQARELL 93
           +   +AE   IP   +GGI  +   + LL
Sbjct: 182 FTKALAEATRIPVIASGGIHNLGDIKALL 210