Pairwise Alignments

Query, 257 a.a., hisF protein (cyclase) (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 245 a.a., 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase from Alteromonas macleodii MIT1002

 Score = 53.1 bits (126), Expect = 5e-12
 Identities = 46/213 (21%), Positives = 94/213 (44%), Gaps = 9/213 (4%)

Query: 6   IVPCLDVKDGCVVK---GVQFRNHEIVGDIVPLAARYAAEGADELVFYDITASAHDRVVD 62
           I+P +D+ DG VV+   G   +  +   D V +   YA +GA  L   D+T +       
Sbjct: 2   IIPAIDLIDGRVVRLYQGDYEQKTQYELDPVDVVHDYADQGATWLHIVDLTGAKDTSKRQ 61

Query: 63  KSWVSRVAEQIDIPFCVAGGIKTITQARELLAFGADKISVNSPALSDPSLISRLQDEFGR 122
            S +  + +   + F   GGI++  +  +LL  G  ++ + S A+  P L+    +++G 
Sbjct: 62  LSLIKSMVDTKRMKFQAGGGIRSEEEVAQLLETGVSRVVIGSLAVKQPELVKSWVEKYGP 121

Query: 123 QCIVIGIDSFYDAASDSYKVKQFTGDEAATKETAWYTQDWVEEVQKRGCGEIVLNVMNQD 182
           + IV+ +D      + S   ++        + +    +  +E+    G   ++   +++D
Sbjct: 122 EHIVLALD-----INISDSGEKLIATHGWQENSGVALEGLLEDFATVGAKHVLCTDISRD 176

Query: 183 GVRGGYDIK-QLSLVRQLCDVPLIASGGAGTMA 214
           G   G + +    +  +   V   ASGG G++A
Sbjct: 177 GTLQGANTELYQEMAARFPHVSWQASGGIGSIA 209