Pairwise Alignments

Query, 395 a.a., tyrosine-specific transport protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 415 a.a., Low affinity tryptophan permease from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  192 bits (488), Expect = 1e-53
 Identities = 123/394 (31%), Positives = 203/394 (51%), Gaps = 16/394 (4%)

Query: 7   FGSLLLIAGTTIGAGMLALPIASAGLGFGMSSMIMLIFWALMAYTALLMVEIHQFAPSDA 66
           F  +++IAGT IG GM ALP+  AG  F   + I++I W  M ++ LL++E +   P  +
Sbjct: 12  FWGVMVIAGTVIGGGMFALPVDLAGAWFFWGAFILIIAWFSMLHSGLLLLEANLNYPVGS 71

Query: 67  SLNQLARHLLGTKGQVVACIALMFLLYALCAAYIAGGGEQVHQKLTSWLGLALPPQAGAI 126
           S N + + L+G    +++ I + F+LY L  AYI+  G  + + ++  LG    P+   I
Sbjct: 72  SFNTITKDLIGNTWNIISGITVAFVLYILTYAYISANGAIISETISMNLGYHANPRIVGI 131

Query: 127 LFTLLIGTIVGLGTHCVDLINRVLFSLKIIALILMLALLLPQVEGTHLLELPLEQG---- 182
              + + +++ + +     I  +   LKII+ +++      QV+ + L +          
Sbjct: 132 CTAIFVASVLWISSLAASRITSLFLGLKIISFVIVFGSFFFQVDYSILRDATSTTAGTSY 191

Query: 183 --LIVSAIPVIFTSFGFHGSIPSVVRYLGIEVKALRKIMLLGSALPLLIYLLWQLGSQGV 240
              I  A+PV   SFGFHG+IPS++   G     L K ++ GS L L+IYL W   + G 
Sbjct: 192 FPYIFMALPVCLASFGFHGNIPSLIICYGKRKDKLIKSVVFGSLLALVIYLFWLYCTMGN 251

Query: 241 LSQSQLMTNQSLSGFISQLA-SVLHSQ---YLSSAISVFADLALATSFLGVSLGLFDFIA 296
           + +       S  G +  L  S L ++    +   + VF++LA+A+SF GV+LGLFD++A
Sbjct: 252 IPRESFKAIISSGGNVDSLVKSFLGTKQHGIIEFCLLVFSNLAVASSFFGVTLGLFDYLA 311

Query: 297 ANLRQEDNATGRSVTAAITFVPPLGFALFYPQGFITALGYAAIALVILAIFLPVSMVWVQ 356
              + +++  GR  T  +TF+PP    L +P GFI  +G A +   I A+ +P  +    
Sbjct: 312 DLFKIDNSHGGRFKTVLLTFLPPALLYLIFPNGFIYGIGGAGLCATIWAVIIPAVLAIKA 371

Query: 357 RKQRDKAKLP-QGYRVAGGTLGLVLALLCGLAVI 389
           RK     K P Q + V GG L   + +L G+ VI
Sbjct: 372 RK-----KFPNQMFTVWGGNLIPAIVILFGITVI 400