Pairwise Alignments

Query, 395 a.a., tyrosine-specific transport protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 403 a.a., Tyrosine-specific transport protein from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  392 bits (1008), Expect = e-114
 Identities = 194/396 (48%), Positives = 275/396 (69%), Gaps = 8/396 (2%)

Query: 3   QNKFFGSLLLIAGTTIGAGMLALPIASAGLGFGMSSMIMLIFWALMAYTALLMVEIHQFA 62
           +N+  GS+ ++AGTTIGAGMLA+P+A+AG+GF ++ ++++  WALM YTALL++E++Q  
Sbjct: 2   KNRTLGSVFIVAGTTIGAGMLAMPLAAAGVGFSVTLILLIGLWALMCYTALLLLEVYQHV 61

Query: 63  PSDASLNQLARHLLGTKGQVVACIALMFLLYALCAAYIAGGGEQVHQKLTSWLGLALPPQ 122
           P+D  L  LA+  LG  GQ +   ++MFL+YAL AAYI+G GE +   ++ W G+++   
Sbjct: 62  PADTGLGTLAKRYLGRYGQWLTGFSMMFLMYALTAAYISGAGELLASSISDWTGISMSAT 121

Query: 123 AGAILFTLLIGTIVGLGTHCVDLINRVLFSLKIIALILMLALLLPQVEGTHLLELPLEQG 182
           AG +LFT + G +V +GT  VDL NR LFS KII L++ML LLLP +   +LL LPL+QG
Sbjct: 122 AGVLLFTFVAGGVVCVGTSLVDLFNRFLFSAKIIFLVVMLVLLLPHIHKVNLLTLPLQQG 181

Query: 183 LIVSAIPVIFTSFGFHGSIPSVVRYLGIEVKALRKIMLLGSALPLLIYLLWQLGSQGVLS 242
           L +SAIPVIFTSFGFHGS+PS+V Y+   V+ LR + + GSA+PL+ Y+ WQ+ + G + 
Sbjct: 182 LALSAIPVIFTSFGFHGSVPSIVSYMDGNVRKLRWVFITGSAIPLVAYIFWQVATLGSID 241

Query: 243 QSQLM----TNQSLSGFISQLASVLHSQYLSSAISVFADLALATSFLGVSLGLFDFIAAN 298
            +  M     +  L+G +  L  ++ S ++  A+ +FADLALATSFLGV+LGLFD++A  
Sbjct: 242 STTFMGLLANHAGLNGLLQALREMVASPHVELAVHLFADLALATSFLGVALGLFDYLADL 301

Query: 299 LRQEDNATGRSVTAAITFVPPLGFALFYPQGFITALGYAAIALVILAIFLPVSMVWVQRK 358
            ++ +   GR  T AITF+PPL FALFYP+GF+ ALGYA +AL +LA+ +P  + W  RK
Sbjct: 302 FQRSNTVGGRLQTGAITFLPPLAFALFYPRGFVMALGYAGVALAVLALIIPSLLTWQSRK 361

Query: 359 QRDKAKLPQGYRVAGGTLGLVLALLCGLAVISAQLL 394
              +A    GYRV GG   LV+  LCG+AVI  Q L
Sbjct: 362 HNPQA----GYRVKGGRPALVVVFLCGIAVIGVQFL 393