Pairwise Alignments

Query, 395 a.a., tyrosine-specific transport protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 414 a.a., tryptophan permease from Escherichia coli ECRC100

 Score =  211 bits (538), Expect = 2e-59
 Identities = 123/393 (31%), Positives = 207/393 (52%), Gaps = 13/393 (3%)

Query: 2   TQNKFFGSLLLIAGTTIGAGMLALPIASAGLGFGMSSMIMLIFWALMAYTALLMVEIHQF 61
           T     G +++I GT IGAGM +LP+  +G  F  S   ++  W  M ++ L+++E +  
Sbjct: 9   TSPSLLGGVVIIGGTIIGAGMFSLPVVMSGAWFFWSMAALIFTWFCMLHSGLMILEANLN 68

Query: 62  APSDASLNQLARHLLGTKGQVVACIALMFLLYALCAAYIAGGGEQVHQKLTSWLGLALPP 121
               +S + + + LLG    VV  I++ F+LY L  AYI+  G  +H      + L +P 
Sbjct: 69  YRIGSSFDTITKDLLGKGWNVVNGISIAFVLYILTYAYISASGSILHHTFAE-MSLNVPA 127

Query: 122 QAGAILFTLLIGTIVGLGTHCVDLINRVLFSLKIIALILMLALLLPQVEGTHLLELPLEQ 181
           +A    F LL+  +V L T  V  +  ++   K+I   L    LL  V+   L  +    
Sbjct: 128 RAAGFGFALLVAFVVWLSTKAVSRMTAIVLGAKVITFFLTFGSLLGHVQPATLFNVAESN 187

Query: 182 G----LIVSAIPVIFTSFGFHGSIPSVVRYLGIEVKALRKIMLLGSALPLLIYLLWQLGS 237
                 ++  +P    SFG+HG++PS+++Y G + K + K ++ G+ + L +Y +W L +
Sbjct: 188 ASYAPYLLMTLPFCLASFGYHGNVPSLMKYYGKDPKTIVKCLVYGTLMALALYTIWLLAT 247

Query: 238 QGVLSQSQLMTNQSLSG----FISQLASVLHSQYLSSAISVFADLALATSFLGVSLGLFD 293
            G + + + +      G     +  L+ VL+S+ L+  + VF++ A+A+SFLGV+LGLFD
Sbjct: 248 MGNIPRPEFIDIAEKGGNIDVLVQALSGVLNSRSLALLLVVFSNFAVASSFLGVTLGLFD 307

Query: 294 FIAANLRQEDNATGRSVTAAITFVPPLGFALFYPQGFITALGYAAIALVILAIFLPVSMV 353
           ++A     +D+A GR  TA +TF PP+   L +P GF+ A+GYA +A  I A  +P  + 
Sbjct: 308 YLADLFGFDDSAVGRLKTALLTFAPPVVGGLLFPNGFLYAIGYAGLAATIWAAIVPALLA 367

Query: 354 WVQRKQRDKAKLPQGYRVAGGTLGLVLALLCGL 386
              RK+    K    +RV GG   + L L+ G+
Sbjct: 368 RASRKRFGSPK----FRVWGGKPMITLILVFGV 396