Pairwise Alignments

Query, 291 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 302 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  186 bits (471), Expect = 7e-52
 Identities = 95/283 (33%), Positives = 163/283 (57%), Gaps = 4/283 (1%)

Query: 10  FVAVAEAENFTLAAQRLNVSTAHVSRQIGALENRLGTKLFYRTTRKVSLTEEGTIYYRHC 69
           FV V E  +F+  A+ +  +   +S+ + ALE  LG KL  R+TR++SLT+EG  YY HC
Sbjct: 10  FVRVIERGSFSAVAREMQTTQPTISKILRALETELGGKLIARSTRQLSLTDEGQRYYSHC 69

Query: 70  RQLQTGLEEAERAITDLKDSPQGLVKLTAPVAYGEKFIMPLLNDFMVQYPSVECNVDLTN 129
           R++   ++ AE +    K++  G +++ + V++G   I   L+DF+ QYP V+ ++ L +
Sbjct: 70  REILAAVDAAEHSFQTGKEAIAGPLRIGSSVSFGRLHIAARLSDFLQQYPDVQVDLQLND 129

Query: 130 RTLDLIEGGYDLAIRLGKLADSSLMAKPLSSRTHYVAASPSYVEKYGEPHTLSELNQHNC 189
              D++  G D+ +R+G+L DS L+A+ + +      ASP Y+ ++  P T  EL+QHNC
Sbjct: 130 HLQDMVSEGLDVTLRIGELRDSGLIARQIGTTHRVTLASPDYLARHPAPQTPHELSQHNC 189

Query: 190 LIGN----HNYWRFIEHGRERNFKVRGKLICNSGYALRDAALKGIGIVQLPDYYIEEDIH 245
           L+ N     N W + + G  ++ ++ G    N+  A+R+  L G+GI   P +   +D+ 
Sbjct: 190 LLFNLLSSQNQWVYEKEGTRQSVRITGNAQSNNSEAVREMVLTGLGIALSPLWLFYDDLK 249

Query: 246 AGRLISFLDTHREAKEGIWALYPQNRHLSAKVRVLVDYLAEKL 288
           AGR+++ L  +      I A+   NR  SA+V+  VDY+A+ L
Sbjct: 250 AGRVVALLQDYTAQSLPIHAVSAPNRRQSARVKAFVDYMADAL 292