Pairwise Alignments

Query, 291 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 295 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  185 bits (469), Expect = 1e-51
 Identities = 104/286 (36%), Positives = 163/286 (56%), Gaps = 6/286 (2%)

Query: 10  FVAVAEAENFTLAAQRLNVSTAHVSRQIGALENRLGTKLFYRTTRKVSLTEEGTIYYRHC 69
           F   A   +F  AA+++ +S A VS+ I  LE  L  +L  RTTR++SLTE G  Y+   
Sbjct: 10  FRTTAATGSFAGAARQMGLSAAAVSKNIAQLEAHLKVRLINRTTRQMSLTEAGAAYHERL 69

Query: 70  RQLQTGLEEAERAITDLKDSPQGLVKLTAPVAYGEKFIMPLLNDFMVQYPSVECNVDLTN 129
            ++   L EA+ A+  +  SP G+++++AP+ +    + P + +FM +YP++   ++L +
Sbjct: 70  SRILDELSEADAALAPMGSSPGGVLRVSAPLTFALTSLSPAIPEFMARYPNLRLELNLQD 129

Query: 130 RTLDLIEGGYDLAIR-LGKLADSSLMAKPLSSRTHYVAASPSYVEKYGEPHTLSELNQHN 188
              D+I  GYDLAIR   +L DSSL+A+ L +  H +  +P Y    G P    +L  H 
Sbjct: 130 SRSDIIGEGYDLAIRGSDRLEDSSLVARRLMTMDHVLCGAPGYFATAGRPARPEDLKAHE 189

Query: 189 C----LIGNHNYWRFIEHGRERNFKVRGKLICNSGYALRDAALKGIGIVQLPDYYIEEDI 244
           C    L G+ N W F   GR     V G+   +S  A+RDA L G G+  +P  Y+E ++
Sbjct: 190 CVQFTLSGHANKWTFSRAGRSVAVPVDGRYKVSSSIAVRDALLAGFGLSLIPRIYVEHEL 249

Query: 245 HAGRLISFLDTHREAKEGIWALYPQNRHLSAKVRVLVDYLAEKLTG 290
            +GRL + L+     K  ++A+YP +RHL+AK RV VD+LAE+ +G
Sbjct: 250 ASGRLQAVLEDWEADKTPVYAVYP-SRHLAAKTRVFVDFLAERFSG 294