Pairwise Alignments

Query, 291 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 294 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  183 bits (464), Expect = 5e-51
 Identities = 101/282 (35%), Positives = 167/282 (59%), Gaps = 3/282 (1%)

Query: 10  FVAVAEAENFTLAAQRLNVSTAHVSRQIGALENRLGTKLFYRTTRKVSLTEEGTIYYRHC 69
           F  V EA +FT AA RL +S   VSR++  LE RLG +L  R+TR++  T  G  YY+  
Sbjct: 10  FAQVMEAGSFTAAADRLGMSKQSVSRRLMQLEERLGVRLLNRSTRRLDATPLGQHYYQSA 69

Query: 70  RQLQTGLEEAERAITDLKDSPQGLVKLTAPVAYGEKFIMPLLNDFMVQYPSVECNVDLTN 129
            +L   +++ E  I+      +G ++L+AP+++    +  LL +F+  +P V+  VDL++
Sbjct: 70  LRLLGEVQQVEHDISGQAQVLRGTLRLSAPLSFAMAHLGCLLTEFLQLHPQVDVEVDLSD 129

Query: 130 RTLDLIEGGYDLAIRLGKLADSSLMAKPLSSRTHYVAASPSYVEKYGEPHTLSELNQHNC 189
           R +DLI  GYDLA+R+G L DSSL+A+ ++S      ASP+Y++  G P    EL  H+C
Sbjct: 130 RAVDLIGEGYDLALRIGALEDSSLIARRIASVERVYCASPAYLQARGVPGKPDELAAHDC 189

Query: 190 LIGNHN---YWRFIEHGRERNFKVRGKLICNSGYALRDAALKGIGIVQLPDYYIEEDIHA 246
           L   H+    W+F + G+ +  +V G++  N+G  LR AA+ G+G+  LP + + + +  
Sbjct: 190 LPYGHSRQVQWQFHKGGKTQAIQVTGRMRANNGELLRGAAIAGMGVTYLPTFIVGQALAE 249

Query: 247 GRLISFLDTHREAKEGIWALYPQNRHLSAKVRVLVDYLAEKL 288
           G+L++ LD  R     + A+YPQ+R ++  V+  V +L  +L
Sbjct: 250 GQLVTVLDEWRPPALQLSAVYPQHRQVARPVQGFVSFLRARL 291