Pairwise Alignments

Query, 291 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 303 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  178 bits (451), Expect = 2e-49
 Identities = 98/283 (34%), Positives = 161/283 (56%), Gaps = 5/283 (1%)

Query: 7   ISEFVAVAEAENFTLAAQRLNVSTAHVSRQIGALENRLGTKLFYRTTRKVSLTEEGTIYY 66
           I+ FV+ A+A +FT AA  L ++ + V + I  LE R+  +L  RTTRK+SLT+EG + +
Sbjct: 9   IAAFVSAAKAGSFTAAAASLGLTRSAVGKSIARLEARMAVRLLNRTTRKLSLTDEGLVAF 68

Query: 67  RHCRQLQTGLEEAERAITDLKDSPQGLVKLTAPVAYGEKFIMPLLNDFMVQYPSVECNVD 126
              RQ+   L+E E  +   +  P G ++LTAP++ G++ ++P+L+ ++ Q+P +  ++ 
Sbjct: 69  ERWRQILDDLDEVESTMALRRGKPTGTLRLTAPLSLGQRHVLPVLDQYLKQWPELRADIR 128

Query: 127 LTNRTLDLIEGGYDLAIRLG-KLADSSLMAKPLSSRTHYVAASPSYVEKYGEPHTLSELN 185
            T+R +DL+E G D+A+R+G    DS L+ + ++ +     ASP+Y+EK G P    +L 
Sbjct: 129 FTDRFVDLVEEGVDVAVRIGAPKEDSQLLTRTVAWQQFVTCASPAYLEKRGVPQIPGDLY 188

Query: 186 QHN---CLIGNHNY-WRFIEHGRERNFKVRGKLICNSGYALRDAALKGIGIVQLPDYYIE 241
            H+    L G     WRF         +  G+L  +S  A+ D A  G G++ LP Y   
Sbjct: 189 GHDKITFLAGEKAMPWRFHTEAGLHLCEDPGRLNIDSSEAMLDGARAGFGLIHLPTYITG 248

Query: 242 EDIHAGRLISFLDTHREAKEGIWALYPQNRHLSAKVRVLVDYL 284
           +D+ AG L+  L  +R   + I  +YP  RHLS +VR  +D L
Sbjct: 249 DDLRAGNLVEVLHAYRPPADPIRIVYPSKRHLSPRVRGFIDLL 291