Pairwise Alignments

Query, 291 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 308 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  202 bits (515), Expect = 6e-57
 Identities = 115/295 (38%), Positives = 157/295 (53%), Gaps = 13/295 (4%)

Query: 3   LWDGISEFVAVAEAENFTLAAQRLNVSTAHVSRQIGALENRLGTKLFYRTTRKVSLTEEG 62
           L   I  F   AE  +FT AA    V+ A VSR I  LE RLG++LF RTTR + LTE G
Sbjct: 9   LLGSIELFCLAAELGSFTAAALAAGVTPAAVSRSISRLEERLGSRLFVRTTRSIRLTEGG 68

Query: 63  TIYYRHCRQLQTGLEEAERAITDLKDSPQGLVKLTAPVAYGEKFIMPLLNDFMVQYPSVE 122
             YY  CRQ  T L EAER +T  +  P G ++++ P  YG   I+PLL +F  +YP V+
Sbjct: 69  RGYYEQCRQALTQLVEAERVVTGQQQEPSGTLRISLPTTYGHHRILPLLPEFRRRYPKVQ 128

Query: 123 CNVDLTNRTLDLIEGGYDLAIRLGKLADSSLMAKPLSSRTHYVAASPSYVEKYGEPHTLS 182
            ++ L NR +D +  GYDLAIR+    DS+L+A+PL      V A+P Y+E  G P +L 
Sbjct: 129 VDIHLGNRNIDFVGEGYDLAIRVRAQPDSTLIARPLEDARLVVVATPDYLEHAGAPQSLE 188

Query: 183 ELNQHNCL------IGNHNYWRFIEHGRERNFKVRGKLICN----SGYALRDAALKGIGI 232
           EL QH+C+       G    W F E GRER     G  +C+     G  L   A  G G+
Sbjct: 189 ELAQHDCIQFELPSSGRRIAWLFDEEGREREVLTEGGYVCSDDVLGGVTL---AKHGAGL 245

Query: 233 VQLPDYYIEEDIHAGRLISFLDTHREAKEGIWALYPQNRHLSAKVRVLVDYLAEK 287
            Q   + +E ++  G L+  L            LYPQ RH+  ++R  VD++ +K
Sbjct: 246 FQTYRFIVERELAEGSLVEVLRPFAGRSRPFTLLYPQGRHMPLRLRAFVDFIMDK 300