Pairwise Alignments

Query, 394 a.a., cation efflux family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 319 a.a., CDF family Co(II)/Ni(II) efflux transporter DmeF from Variovorax sp. OAS795

 Score =  271 bits (693), Expect = 2e-77
 Identities = 151/371 (40%), Positives = 209/371 (56%), Gaps = 61/371 (16%)

Query: 18  HSIAQWQHPHGFSKQNADGEKNTRYVLYLTVITMVAEIVAGTIYGSMALLADGWHMGTHA 77
           H +  WQH H F   N   E++TR V+++T+  M  EI AG  + SMALLADGWHM +HA
Sbjct: 4   HDLRAWQHDHHFGAGNEKAERSTRLVMWITLAAMGIEIGAGWWFNSMALLADGWHMSSHA 63

Query: 78  AAFMITLFAYSYARKHANDPAFAFGTGKVSVLGGYTSAIALGLVALIMLIESGMRLINPE 137
            A  ++ FAY+ AR++A DP FAFGT K+ VLGG+ SA+ L  VA +M++ S  RL++P 
Sbjct: 64  LAIGLSAFAYAAARRYARDPRFAFGTWKIEVLGGFASALMLLGVAALMVVGSIERLLSPS 123

Query: 138 NIHFNEAIFVALIGLSVNVLSMFLLKDHHSHDHGHSHGNSHGHSLHQVHDKHEHTAHKDN 197
            IH+ EA+ VA++GL VN++   LL   H H HGH HG             H H+AH   
Sbjct: 124 AIHYREAVAVAVLGLVVNLVCARLLGSAHHHGHGHDHG-------------HAHSAH--- 167

Query: 198 HCCDGLEHHAADHDHDHDHDHDHDHDHDHDHDNHSHNHAHGHSHGHSGHDHNLRAAYFHV 257
                      DH H H                              GHD NLR+AY HV
Sbjct: 168 -----------DHGHSH------------------------------GHDLNLRSAYLHV 186

Query: 258 LADALTSVLAIAALLFGKYMGLTWLDPIMGIVGAIIISRWSWGLIQQTSPILLDGGVNVA 317
           +ADA TSVLAIAALL G + G  WLDP MGIVGA++++ W+ GL+++T  +LLD  ++  
Sbjct: 187 VADAATSVLAIAALLGGWFFGWAWLDPAMGIVGAVLVAVWAKGLLKETGRVLLDREMDHP 246

Query: 318 LQRKVRETIE---AVPDHQVADLHIWRVSADHHAIMASIVSHS-PKEASYFNQLLSQFPE 373
           +  ++RE +E   A  + +VADLH+WRV  + +A   ++V+HS    A       S   E
Sbjct: 247 VTAEIREGVETLLADSETRVADLHVWRVGREAYACALTVVTHSLTLSADEVRACFSMHEE 306

Query: 374 LSHITIELHTC 384
           + H T+E+  C
Sbjct: 307 IRHSTVEIQRC 317