Pairwise Alignments

Query, 394 a.a., cation efflux family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 313 a.a., CDF family zinc transporter ZitB from Escherichia coli ECRC98

 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 8/166 (4%)

Query: 25  HPHGFSKQNADGEKNTRYVLYLTVIT---MVAEIVAGTIYGSMALLADGWHMGTHAAAFM 81
           H H  +  +   + N R +LY   +T   M+ E++ G + GS+ALLAD  HM T  AA +
Sbjct: 3   HSHSHTSSHLPEDNNARRLLYAFGVTAGFMLVEVIGGFLSGSLALLADAGHMLTDTAALL 62

Query: 82  ITLFAYSYARKHANDPAFAFGTGKVSVLGGYTSAIALGLVALIMLIESGMRLINPENIHF 141
             L A  ++R+        FG  +++ L  + +AIAL ++ ++++ E+  R   P  +  
Sbjct: 63  FALLAVQFSRRPPT-IRHTFGWLRLTTLAAFVNAIALVVITILIVWEAIERFRTPRPVEG 121

Query: 142 NEAIFVALIGLSVNVLSMFLLKDHHSHDHGHSHGNSHGHSLHQVHD 187
              + +A+ GL  N+LS +LL  HH  +    + N    +LH + D
Sbjct: 122 GMMMAIAVAGLLANILSFWLL--HHGSE--EKNLNVRAAALHVLGD 163



 Score = 58.2 bits (139), Expect = 3e-13
 Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 2/104 (1%)

Query: 241 HGHSGHDHNLRAAYFHVLADALTSVLAIAALLFGKYMGLTWLDPIMGIVGAIIISRWSWG 300
           HG    + N+RAA  HVL D L SV AI A L   + G T  DPI+ I+ ++++ R +W 
Sbjct: 144 HGSEEKNLNVRAAALHVLGDLLGSVGAIIAALIIIWTGWTPADPILSILVSLLVLRSAWR 203

Query: 301 LIQQTSPILLDGG-VNVALQRKVRETIEAVPD-HQVADLHIWRV 342
           L++ +   LL+G  V++ +    R     +P+   V  +H+W V
Sbjct: 204 LLKDSVNELLEGAPVSLDIAELKRRMCREIPEVRNVHHVHVWMV 247