Pairwise Alignments

Query, 344 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 337 a.a., sulfoxide reductase catalytic subunit YedY from Pseudomonas simiae WCS417

 Score =  334 bits (857), Expect = 2e-96
 Identities = 173/328 (52%), Positives = 222/328 (67%), Gaps = 7/328 (2%)

Query: 21  DNQVTPESVFKARRHIVKAMGLGAIGASISGYVQAGLFDLFGEQPQ---TSFITTPLT-F 76
           ++ VTPES + +RR ++     G   +S+  +  A     + +        + T  L+  
Sbjct: 13  ESDVTPESFYLSRRSLLGGALAGIAASSLPRWASADEASRYADVEAGRAPGWFTEKLSGT 72

Query: 77  EANARFGQDEVRTPFDKVTTHNNFYEFGTSKQDPSDNAQQYKVEPWQLRIEGEVERPITL 136
           +  A   +DE  TPF   T +NNFYEFGT K DP+ NA   K EPW + I+GEV +P   
Sbjct: 73  KWQAVTVKDEAITPFKDATHYNNFYEFGTGKGDPATNAGSLKTEPWSVVIDGEVAKPGRY 132

Query: 137 DYQDLTKLFPLEERIYRLRCVEAWSMVIPWVGFPLAALLKKVGVTSKGKYVAFETAFDPE 196
             +D  K + LEERIYRLRCVEAWSMVIPW+GFP++ALLK+V  TSK KY+ FET  DP+
Sbjct: 133 ALEDFMKPYQLEERIYRLRCVEAWSMVIPWIGFPISALLKQVEPTSKAKYIRFETLQDPK 192

Query: 197 QMPGQKSRLMGGGIHYPYVEGLTIAEAMNELTLMSVGLYGKTLPPQNGAPIRLVVPWKYG 256
            MPGQ+S    G I +PYVEGL + EAMN L +++VG+YG+ LP QNGAP+RLVVPWKYG
Sbjct: 193 SMPGQRSSF--GLIDWPYVEGLRLDEAMNPLAILAVGMYGRELPNQNGAPLRLVVPWKYG 250

Query: 257 FKSIKSIVRIRVMDKQPPTSWNQLAPHEYGFYANVNPAVDHPRWSQASERRIGEGGLFSA 316
           FKS+KSIVRI ++ +QP T+W  +A  EYGFYANVNP VDHPRW+QA ERR+   GLFS 
Sbjct: 251 FKSVKSIVRISLVSEQPKTTWQSIAADEYGFYANVNPTVDHPRWTQARERRL-PSGLFSP 309

Query: 317 QRIDTLPFNGYSEFVASLYEGMDLRQFY 344
              +T  FNGYS+ VASLY  +DLR+ Y
Sbjct: 310 NVRETQMFNGYSDEVASLYTDLDLRKNY 337