Pairwise Alignments

Query, 344 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 331 a.a., protein-methionine-sulfoxide reductase catalytic subunit MsrP from Ralstonia solanacearum PSI07

 Score =  346 bits (887), Expect = e-100
 Identities = 179/343 (52%), Positives = 228/343 (66%), Gaps = 22/343 (6%)

Query: 11  ILKKARW----HIQDNQVTPESVFKARRHIVKAMGLGAIGASISGYVQAGLFDLFGEQPQ 66
           ++K  RW     I  +++TP+ +F+ RR ++ A  LG  G ++S +     F        
Sbjct: 2   LIKTDRWLRGDDIPPSEITPQHIFEQRRRLLTAAALGVAGTALSPWAARQAF-------A 54

Query: 67  TSFITTPLTFEANARFGQDEVRTPFDKVTTHNNFYEFGTSKQDPSDNAQQYKVEPWQLRI 126
            S     L    N  +   E  TPF++VTT+NNFYEFGT K DP+  A   +  PWQ+ +
Sbjct: 55  ASPALAKLAARPNPAYATVEKPTPFEEVTTYNNFYEFGTDKSDPAHYAGTLRPHPWQVSV 114

Query: 127 EGEVERPITLDYQDLTKLFPLEERIYRLRCVEAWSMVIPWVGFPLAALLKKVGVTSKGKY 186
           EG V+ P T D  DL K+ P+EERIYRLRCVE WSMVIPWVGFPLA L+++V      KY
Sbjct: 115 EGLVKTPKTYDLDDLMKMAPMEERIYRLRCVEGWSMVIPWVGFPLAELIRRVEPQGGAKY 174

Query: 187 VAFETAFDPEQMPGQKSRLMGGGIHYPYVEGLTIAEAMNELTLMSVGLYGKTLPPQNGAP 246
           + F +  D  QMPG  S ++     +PY EGL + EAM+ L L++ GLYG+ LP QNGAP
Sbjct: 175 IQFISLADKRQMPGISSPVLD----WPYSEGLRMDEAMHPLALLTFGLYGQALPNQNGAP 230

Query: 247 IRLVVPWKYGFKSIKSIVRIRVMDKQPPTSWNQLAPHEYGFYANVNPAVDHPRWSQASER 306
           +R++VPWKYGFKS KSIVRIR +DKQPPTSWN  AP+EYGFY+NVNP VDHPRWSQA+ER
Sbjct: 231 VRVIVPWKYGFKSAKSIVRIRFVDKQPPTSWNIAAPNEYGFYSNVNPNVDHPRWSQATER 290

Query: 307 RIGE-----GGLFSAQRIDTLPFNGYSEFVASLYEGMDLRQFY 344
           RIGE     GGLF+ +R  TL FNGY + V SLY GMDLR+F+
Sbjct: 291 RIGEDKGGFGGLFAPKR-KTLMFNGYDQ-VGSLYTGMDLRKFF 331