Pairwise Alignments

Query, 344 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 256 a.a., Putative protein-methionine-sulfoxide reductase subunit YedZ1 from Pseudomonas sp. DMC3

 Score = 77.4 bits (189), Expect = 4e-19
 Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 20/166 (12%)

Query: 112 DNAQQYKVEPWQLRIEGEVERPITLDYQDLTKLFPLEERIYRLRCVEAWSMVIPWVGFPL 171
           D+  +  +  + L + G +        + L KL P    I RL CVE WS +  W G PL
Sbjct: 100 DDIPEVDLTSYSLAVSGRIRDKAPWTLESLRKL-PQRSDITRLICVEGWSAIGQWGGVPL 158

Query: 172 AALLKKVGVTSKGKYVAFETAFDPEQMPGQKSRLMGGGIHYPYVEGLTIAEAMNELTLMS 231
              L+ +G  +  K+V F+ A                     Y   L +  A++  TL++
Sbjct: 159 KTFLEHIGADTTAKFVGFKCADR-------------------YYSSLDMPTALHPQTLLA 199

Query: 232 VGLYGKTLPPQNGAPIRLVVPWKYGFKSIKSIVRIRVMDKQPPTSW 277
           +      LPP+ G P+R+ VP K GFK+ K +V I V D  P   W
Sbjct: 200 LDYADVALPPEYGYPLRVRVPTKLGFKNPKHVVEIFVSDDNPGGYW 245