Pairwise Alignments

Query, 344 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 333 a.a., protein-methionine-sulfoxide reductase catalytic subunit MsrP from Pectobacterium carotovorum WPP14

 Score =  393 bits (1009), Expect = e-114
 Identities = 196/320 (61%), Positives = 235/320 (73%), Gaps = 3/320 (0%)

Query: 24  VTPESVFKARRHIVKAMGLGAIGASISGYVQAGLFDLF--GEQPQTSFITTPLTFEANAR 81
           VTPES+F  RR ++KA+G+ A   S+    QA L      G++P+      PLTF   A 
Sbjct: 12  VTPESLFYQRRRVLKALGISAAALSLPFSAQADLLAWLKGGDKPKAP-PGKPLTFSQPAD 70

Query: 82  FGQDEVRTPFDKVTTHNNFYEFGTSKQDPSDNAQQYKVEPWQLRIEGEVERPITLDYQDL 141
           +  D   TP DKVT +NNFYEFG  K DP+ NA   K E W ++I+G+V +P+TLD  DL
Sbjct: 71  WKLDLPLTPEDKVTGYNNFYEFGLDKADPAANAGGLKTEGWTVKIDGDVAKPLTLDIDDL 130

Query: 142 TKLFPLEERIYRLRCVEAWSMVIPWVGFPLAALLKKVGVTSKGKYVAFETAFDPEQMPGQ 201
            K FPLEERIYR RCVEAWSMVIPWVGF LA L+K    TS  +YVAF+T +DPEQMPGQ
Sbjct: 131 LKRFPLEERIYRFRCVEAWSMVIPWVGFELAKLIKFAEPTSNARYVAFQTLYDPEQMPGQ 190

Query: 202 KSRLMGGGIHYPYVEGLTIAEAMNELTLMSVGLYGKTLPPQNGAPIRLVVPWKYGFKSIK 261
           K R MGGG+ YPYVEGL + EAMN L L++VG+YGKTLPPQNGAPIRLV PWKYGFK+IK
Sbjct: 191 KDRFMGGGLDYPYVEGLRMDEAMNPLALLAVGVYGKTLPPQNGAPIRLVTPWKYGFKNIK 250

Query: 262 SIVRIRVMDKQPPTSWNQLAPHEYGFYANVNPAVDHPRWSQASERRIGEGGLFSAQRIDT 321
           SIV IR+  ++PP +WN  AP EYGFYANVNP VDHPRWSQA+ER IG GGL + +R  T
Sbjct: 251 SIVHIRLTREKPPCTWNLAAPDEYGFYANVNPHVDHPRWSQATERVIGSGGLLNVERQPT 310

Query: 322 LPFNGYSEFVASLYEGMDLR 341
           L FNGY++ VASLY G++LR
Sbjct: 311 LLFNGYADQVASLYRGLNLR 330