Pairwise Alignments

Query, 344 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 334 a.a., Putative sulfite oxidase subunit YedY from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  396 bits (1018), Expect = e-115
 Identities = 198/333 (59%), Positives = 237/333 (71%), Gaps = 3/333 (0%)

Query: 12  LKKARWHIQDNQVTPESVF-KARRHIVKAMGLGAIGASISGYVQAGLFDLF-GEQPQTSF 69
           +KK R  + +  VT ES F   RR ++KA+G+ A   S+    QA LF  F G     + 
Sbjct: 1   MKKIR-PLTEADVTAESAFFMQRRQVLKALGISAAALSLPSTAQADLFSWFKGNDRPKAP 59

Query: 70  ITTPLTFEANARFGQDEVRTPFDKVTTHNNFYEFGTSKQDPSDNAQQYKVEPWQLRIEGE 129
              PL F   A +  D   TP DKVT +NNFYEFG  K DP+ NA   K EPW L+I GE
Sbjct: 60  AGKPLEFSQPAAWRSDLALTPEDKVTGYNNFYEFGLDKADPAANAGSLKTEPWTLKISGE 119

Query: 130 VERPITLDYQDLTKLFPLEERIYRLRCVEAWSMVIPWVGFPLAALLKKVGVTSKGKYVAF 189
           V +P TLDY DLT  FPLEERIYR+RCVEAWSMV+PW+GFPL  LL +   TS  KYVAF
Sbjct: 120 VAKPFTLDYDDLTHRFPLEERIYRMRCVEAWSMVVPWIGFPLYKLLAQAQPTSHAKYVAF 179

Query: 190 ETAFDPEQMPGQKSRLMGGGIHYPYVEGLTIAEAMNELTLMSVGLYGKTLPPQNGAPIRL 249
           ET + P+ MPGQK R +GGG+ YPYVEGL + EAM+ LTLM+VG+YGK LPPQNGAPIRL
Sbjct: 180 ETLYAPDDMPGQKDRFIGGGLKYPYVEGLRLDEAMHPLTLMTVGVYGKALPPQNGAPIRL 239

Query: 250 VVPWKYGFKSIKSIVRIRVMDKQPPTSWNQLAPHEYGFYANVNPAVDHPRWSQASERRIG 309
           +VPWKYGFK IKSIV I++  ++PPT+WN  AP+EYGFYANVNP VDHPRWSQA+ER IG
Sbjct: 240 IVPWKYGFKGIKSIVSIKLTRERPPTTWNLSAPNEYGFYANVNPHVDHPRWSQATERFIG 299

Query: 310 EGGLFSAQRIDTLPFNGYSEFVASLYEGMDLRQ 342
            GG+   QR  TL FNGY+  VASLY G++LR+
Sbjct: 300 SGGILDVQRQPTLLFNGYANEVASLYRGLNLRE 332