Pairwise Alignments

Query, 344 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 334 a.a., protein-methionine-sulfoxide reductase catalytic subunit MsrP from Erwinia amylovora T8

 Score =  375 bits (963), Expect = e-109
 Identities = 184/333 (55%), Positives = 232/333 (69%), Gaps = 2/333 (0%)

Query: 14  KARWHIQDNQVTPESVFKARRH-IVKAMGLGAIGASISGYVQAGLFDLF-GEQPQTSFIT 71
           KA   + +N VTPES+F ARR  ++K +GL A   S  G   A L   F G +   +   
Sbjct: 2   KAVNQLTENDVTPESIFHARRRTVLKMLGLSAAALSQPGAAHADLLSWFKGSERPRAAPG 61

Query: 72  TPLTFEANARFGQDEVRTPFDKVTTHNNFYEFGTSKQDPSDNAQQYKVEPWQLRIEGEVE 131
            PL F    +F      TP DKVT +NNFYEFG  K DP+ +A   K   W++ IEGEV 
Sbjct: 62  RPLDFSKPPQFQPSLPLTPEDKVTGYNNFYEFGLDKADPAAHAGTLKTADWKIEIEGEVA 121

Query: 132 RPITLDYQDLTKLFPLEERIYRLRCVEAWSMVIPWVGFPLAALLKKVGVTSKGKYVAFET 191
           +P+TL   D+ K F LE+RIYR+RCVE WSMV+PWVGF L  LL+    TS  ++VAF T
Sbjct: 122 KPLTLSMDDIFKRFALEQRIYRMRCVEGWSMVVPWVGFELGKLLQAAEPTSSARFVAFHT 181

Query: 192 AFDPEQMPGQKSRLMGGGIHYPYVEGLTIAEAMNELTLMSVGLYGKTLPPQNGAPIRLVV 251
            + P+QMPGQ+ R +GGG+ YPYVEGL + EAM+ LT+++ G+YGK LPPQNGAPIRL V
Sbjct: 182 LYAPDQMPGQQDRFIGGGLDYPYVEGLRLDEAMHPLTMLTTGVYGKALPPQNGAPIRLTV 241

Query: 252 PWKYGFKSIKSIVRIRVMDKQPPTSWNQLAPHEYGFYANVNPAVDHPRWSQASERRIGEG 311
           PWKYGFK IKSIV+IR++ + PPT+WN  AP+EYGFYANVNP VDHPRWSQA+ER IG G
Sbjct: 242 PWKYGFKGIKSIVKIRLVREMPPTTWNLSAPNEYGFYANVNPHVDHPRWSQATERFIGSG 301

Query: 312 GLFSAQRIDTLPFNGYSEFVASLYEGMDLRQFY 344
           G+   QR  TL FNGY++ VA+LY G+DLR+ +
Sbjct: 302 GILDVQRQPTLLFNGYADQVATLYRGLDLREHF 334