Pairwise Alignments

Query, 344 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 334 a.a., protein-methionine-sulfoxide reductase catalytic subunit MsrP from Escherichia coli ECRC99

 Score =  389 bits (999), Expect = e-113
 Identities = 191/331 (57%), Positives = 236/331 (71%), Gaps = 2/331 (0%)

Query: 14  KARWHIQDNQVTPESVF-KARRHIVKAMGLGAIGASISGYVQAGLFDLF-GEQPQTSFIT 71
           K    ++++ VT ESVF   RR ++KA+G+ A   S+     A L   F G     +   
Sbjct: 2   KKNQFLKESDVTAESVFFMKRRQVLKALGISAAALSLPHAAHADLLSWFKGNDRPPAPAG 61

Query: 72  TPLTFEANARFGQDEVRTPFDKVTTHNNFYEFGTSKQDPSDNAQQYKVEPWQLRIEGEVE 131
             L F   A +  +   TP DKV+ +NNFYEFG  K DP+ NA   K +PW L+I GEV 
Sbjct: 62  KALEFSKPAAWQNNLPLTPADKVSGYNNFYEFGLDKADPAANAGSLKTDPWTLKISGEVA 121

Query: 132 RPITLDYQDLTKLFPLEERIYRLRCVEAWSMVIPWVGFPLAALLKKVGVTSKGKYVAFET 191
           +P+TLD+ DLT+ FPLEERIYR+RCVEAWSMV+PW+GFPL  LL     TS  KYVAFET
Sbjct: 122 KPLTLDHDDLTRRFPLEERIYRMRCVEAWSMVVPWIGFPLHKLLALAEPTSNAKYVAFET 181

Query: 192 AFDPEQMPGQKSRLMGGGIHYPYVEGLTIAEAMNELTLMSVGLYGKTLPPQNGAPIRLVV 251
            + PEQMPGQ+ R +GGG+ YPYVEGL + EAM+ LTLM+VG+YGK LPPQNGAP+RL+V
Sbjct: 182 IYAPEQMPGQQDRFIGGGLKYPYVEGLRLDEAMHPLTLMTVGVYGKALPPQNGAPVRLIV 241

Query: 252 PWKYGFKSIKSIVRIRVMDKQPPTSWNQLAPHEYGFYANVNPAVDHPRWSQASERRIGEG 311
           PWKYGFK IKSIV I++  ++PPT+WN  AP EYGFYANVNP VDHPRWSQA+ER IG G
Sbjct: 242 PWKYGFKGIKSIVSIKLTRERPPTTWNLAAPDEYGFYANVNPHVDHPRWSQATERFIGSG 301

Query: 312 GLFSAQRIDTLPFNGYSEFVASLYEGMDLRQ 342
           G+   QR  TL FNGY++ VASLY G+DLR+
Sbjct: 302 GILDVQRQPTLLFNGYADQVASLYRGLDLRE 332