Pairwise Alignments

Query, 537 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 495 a.a., DNA recombination limiting inversions protein from Pseudomonas putida KT2440

 Score =  338 bits (866), Expect = 4e-97
 Identities = 198/499 (39%), Positives = 303/499 (60%), Gaps = 30/499 (6%)

Query: 16  IAVAFLGLLIGAL-----LNQRLTRSRWQQFKDDLEQEMRQVNEDAELSLAQQQILVDDK 70
           +A   LGL+ GA+     + Q   R   +Q +  L +E     + A+  L  Q     D+
Sbjct: 5   LASILLGLVAGAIPCLVWVMQVQRRQGARQAEQALLEERLNAAQLAQAGLQAQLDASRDE 64

Query: 71  DSQL---------RLCQQRLEQKIEHLGKAEAL-AERVPSLEQQLSDSHRRQLELQLALS 120
            S L         +L  Q  E ++  + +  A  A    SLE+   ++  R+LE Q A  
Sbjct: 65  VSDLSEANAVKQAQLAAQSRELELLQIDRDNARDAAHAWSLERANREAELRRLEAQTA-- 122

Query: 121 KSNAMQQTIQAKADAQQESLREKIATLESAEVRLQTQFENLANRIFEERSENFKHQNANQ 180
                   + A+   QQES ++++  L+ A   L+ QF ++A +IF+ER + F   +   
Sbjct: 123 -------RLDAELREQQESHQQRLEDLQEARDTLRAQFADMATKIFDEREQRFAQTSQQH 175

Query: 181 LEGVLGPLKQQLEGFRQQIRESYNHEQSERSALKHQLEHLRDLNLKMSQDAINLTKALKG 240
           L  +L PLK++++ F +++ ESY  E  ER +L  +LE L+ LNL++S +A NLT+ALKG
Sbjct: 176 LGQLLDPLKERIQAFEKRVEESYQQEARERFSLGKELERLQQLNLRLSDEATNLTQALKG 235

Query: 241 DNKQQGNWGEVILDRVLQESGLREGHEYHTQQDLKDDSGKRFKPDVIVHLPENKDVVIDA 300
             K QGNWGE+IL+RVL+ +GL +G EY TQ  LK   G+RF+PDV++ LP +K VV+DA
Sbjct: 236 Q-KTQGNWGELILERVLEHAGLEKGREYQTQVSLKSADGERFQPDVLIMLPGDKQVVVDA 294

Query: 301 KMSLISYERYFNSEDPLVREQAINEHVLSIRNHIKGLSQKDYQRLHGLKSLDYVLMFIPI 360
           K+SL +Y+++    D    E A+ +HV S+R+H+KGLS KDY RL GL SLD+VL+F+PI
Sbjct: 295 KVSLTAYQQFVAGND----EVALKQHVQSLRSHVKGLSSKDYSRLEGLHSLDFVLLFVPI 350

Query: 361 EPAFLLALEHDPSLVNFALEQNIMLVSPTNLLVALRTINNIWRYEYQNQHAQTIAKQAGR 420
           E AF  AL+ +P+L   A ++ I++VSPT LL  LR I+++W+ E Q Q+A+ IA++AG 
Sbjct: 351 EAAFSAALQAEPNLFQEAFDRQIVIVSPTTLLATLRVIDSLWKQERQGQNAREIAERAGW 410

Query: 421 IYDKLCGYLEDMEKLGRALDNAEKTYHSAMNKLSSGKGNLVRQAHLMQQLGVDTSKQLDK 480
           +YDK   +++D+++LG  L   +K Y +A NKL  G+GNLV ++  ++ LG   SK L  
Sbjct: 411 LYDKFVLFIQDLDELGSRLQQVDKAYAAARNKLCEGRGNLVSRSEQLKLLGARASKSLPA 470

Query: 481 MLLEKAL-NEALDDSDVAQ 498
            LLE+AL +EAL +  V +
Sbjct: 471 DLLERALSDEALPEVAVTE 489