Pairwise Alignments

Query, 537 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 520 a.a., DNA recombination protein RmuC from Pectobacterium carotovorum WPP14

 Score =  432 bits (1111), Expect = e-125
 Identities = 226/468 (48%), Positives = 319/468 (68%), Gaps = 5/468 (1%)

Query: 21  LGLLIGALLNQRLTRSRWQQFKDDLEQEMRQVNEDAELSLAQQQILVDDKDSQLRLCQQR 80
           +GLL+G L+   + + +  +  D  +Q + Q  +  + S ++QQ      + +LR  Q  
Sbjct: 14  VGLLVGWLIASLIHQQKLSRH-DTEQQLLAQTLQQTQQSFSEQQQAKQQDEQRLR--QNE 70

Query: 81  LEQKIEH--LGKAEALAERVPSLEQQLSDSHRRQLELQLALSKSNAMQQTIQAKADAQQE 138
           LE +  H  L  +    +++  L ++    ++    L+   S   A  + +  + +  + 
Sbjct: 71  LELRTVHVQLSASHEKLQQLTELREECVQLNQELRTLREINSAQEAELREVTIRLEETRM 130

Query: 139 SLREKIATLESAEVRLQTQFENLANRIFEERSENFKHQNANQLEGVLGPLKQQLEGFRQQ 198
           +  EK   L ++E RL TQFENLANRIFE        QN   L+ +L PL++QL+GFR+Q
Sbjct: 131 AAEEKQRLLANSEQRLTTQFENLANRIFEHSGRKVDEQNKQSLDKLLMPLREQLDGFRRQ 190

Query: 199 IRESYNHEQSERSALKHQLEHLRDLNLKMSQDAINLTKALKGDNKQQGNWGEVILDRVLQ 258
           +++S+  E  ER  L H++ +L+ LN +M+ +AINLTKALKGDNK QGNWGEV+L RVL+
Sbjct: 191 VQDSFGAEARERHTLAHEIRNLQQLNAQMAHEAINLTKALKGDNKTQGNWGEVVLSRVLE 250

Query: 259 ESGLREGHEYHTQQDLKDDSGKRFKPDVIVHLPENKDVVIDAKMSLISYERYFNSEDPLV 318
            SGLREG+EY TQ  ++  +  R +PDVIV LP+ KDVVIDAKMSL++YERYFNS+D   
Sbjct: 251 ASGLREGYEYQTQVSVQTGTNSRLQPDVIVRLPQGKDVVIDAKMSLVAYERYFNSDDDAE 310

Query: 319 REQAINEHVLSIRNHIKGLSQKDYQRLHGLKSLDYVLMFIPIEPAFLLALEHDPSLVNFA 378
           R  A+NEH+LS+R+HI+ LS KDYQ+L GL+SLDYVLMFIP+EPAFL+A++  P L+N A
Sbjct: 311 RSVALNEHLLSVRSHIRQLSSKDYQQLPGLRSLDYVLMFIPVEPAFLVAIDRQPELINEA 370

Query: 379 LEQNIMLVSPTNLLVALRTINNIWRYEYQNQHAQTIAKQAGRIYDKLCGYLEDMEKLGRA 438
           L+ NIMLVSPT LLVALRTINN+WRYE Q+++AQ IA++A R+YDKL  +++DME LG++
Sbjct: 371 LKHNIMLVSPTTLLVALRTINNLWRYEQQSRNAQQIAEKASRLYDKLRLFVDDMEALGQS 430

Query: 439 LDNAEKTYHSAMNKLSSGKGNLVRQAHLMQQLGVDTSKQLDKMLLEKA 486
           LD A+ TY  AMNKLSSG+GNL+ QA   + LGV+  + +   L EKA
Sbjct: 431 LDKAQGTYRQAMNKLSSGRGNLIGQAEGFRALGVEIKRTISPSLAEKA 478