Pairwise Alignments

Query, 537 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 510 a.a., DNA recombination protein RmuC from Dickeya dadantii 3937

 Score =  429 bits (1102), Expect = e-124
 Identities = 242/499 (48%), Positives = 330/499 (66%), Gaps = 29/499 (5%)

Query: 22  GLLIGALLNQRLTRSRWQQFKDDLEQEMRQVNEDAELSLAQQ------QILVDDKDSQLR 75
           G ++G LL   L  S WQQ         RQ   D EL L QQ      Q L++ +  +L+
Sbjct: 11  GGVVGLLLGW-LAASLWQQ--------QRQARHDTELQLQQQALEQARQQLIESQQIRLQ 61

Query: 76  LCQQRLEQKIEHL----GKAEALAERVPSLEQQLSDSHRRQLELQLALSKSNAMQQTIQA 131
             QQRL+Q+ + L    G+  A  E++  L +   +  +   EL+ AL ++N  Q+    
Sbjct: 62  -DQQRLDQQTQELRTLHGQLAAGEEKLRQLAELREECLQLNQELR-ALREANGAQEAELR 119

Query: 132 KADAQQESLR----EKIATLESAEVRLQTQFENLANRIFEERSENFKHQNANQLEGVLGP 187
           +   + E  R    EK   L ++E RL TQFENLANRIFE+       QN   +E +L P
Sbjct: 120 EVTIRLEETRLAAEEKQRLLMNSEQRLSTQFENLANRIFEQNGHKVDQQNQQSMEKLLTP 179

Query: 188 LKQQLEGFRQQIRESYNHEQSERSALKHQLEHLRDLNLKMSQDAINLTKALKGDNKQQGN 247
           L++QL+GFR+Q++ES+  E  ER  L H++ +L+ LN +M+Q+AINLT ALKGDNK QGN
Sbjct: 180 LREQLDGFRRQVQESFGAESKERHTLAHEIRNLQQLNARMAQEAINLTNALKGDNKTQGN 239

Query: 248 WGEVILDRVLQESGLREGHEYHTQQDLKDDSGKRFKPDVIVHLPENKDVVIDAKMSLISY 307
           WGEV+L RVL+ SGLREGHEY TQ  ++  +  R +PDVIV LP  KDVVIDAKMSL++Y
Sbjct: 240 WGEVVLGRVLESSGLREGHEYDTQVSVQTGNNSRLQPDVIVRLPHGKDVVIDAKMSLVAY 299

Query: 308 ERYFNSEDPLVREQAINEHVLSIRNHIKGLSQKDYQRLHGLKSLDYVLMFIPIEPAFLLA 367
           ERYFNS++   R  A+NEH+LSIRNHI+ L  KDYQ+L GL+SLDYVLMFIP+EPAFL+A
Sbjct: 300 ERYFNSDNEAERAAALNEHLLSIRNHIRLLGSKDYQQLPGLRSLDYVLMFIPVEPAFLVA 359

Query: 368 LEHDPSLVNFALEQNIMLVSPTNLLVALRTINNIWRYEYQNQHAQTIAKQAGRIYDKLCG 427
           ++  P L+  AL  NIMLVSPT LLVALRTINN+WRYE Q+++AQ IA++A R+YDKL  
Sbjct: 360 IDRQPDLITEALRHNIMLVSPTTLLVALRTINNLWRYEQQSRNAQLIAERASRLYDKLRL 419

Query: 428 YLEDMEKLGRALDNAEKTYHSAMNKLSSGKGNLVRQAHLMQQLGVDTSKQLDKMLLEKAL 487
           +++DM  LG+ LD A+  Y  AM KL+SG+GNL+ QA   + LGV+  + ++  +++   
Sbjct: 420 FVDDMAALGQGLDKAQAGYRQAMKKLASGRGNLIGQAEGFRALGVEIKRPVNVPVMQ--- 476

Query: 488 NEALD-DSDVAQTNDIEDD 505
           +E L  D   A + D++DD
Sbjct: 477 DEPLAYDELPALSQDLDDD 495