Pairwise Alignments

Query, 537 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 410 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 63.2 bits (152), Expect = 2e-14
 Identities = 69/313 (22%), Positives = 142/313 (45%), Gaps = 25/313 (7%)

Query: 113 LELQLALSKSNAMQQTIQAKADAQQESLREKIATLESAEVRLQTQFENLANRIFEERSEN 172
           L L L ++      +T +A AD++   L   + T      R+    E L  R  E     
Sbjct: 42  LVLGLTITWLVTTNRTRKAGADSEISDL---LKTQSELHGRIAAMAETLGTRQTE----- 93

Query: 173 FKHQNANQ-LEGVLGPLKQQLEGFRQQIRESYNHEQSERSALKHQLEHLRDLNLKMSQDA 231
              Q  NQ L+G+   L + L    +   E+ +  Q   + +     +++DL    ++D 
Sbjct: 94  -MSQTLNQRLDGMSQRLGETLTEQTRSTHENLSRLQERLAVIDAAQGNIQDL----AKDV 148

Query: 232 INLTKALKGDNKQQGNWGEVILDRVLQESGLREGHEYHTQQDLKDDSGKRFKPDVIVHLP 291
           + L +A+  + + +G +G+  ++ ++ ++ L  G  +  Q  L +     ++PD I+ +P
Sbjct: 149 VGL-QAILSNKQTRGAFGQARMETLIADA-LPAG-AFQLQPTLSNG----YRPDCIIKMP 201

Query: 292 ENKD-VVIDAKMSLISYERYFNSEDPLVREQAINEHVLSIRNHIKGLSQKDYQRLHGLKS 350
            N   +VIDAK  L ++      E P  +  A+ +    +  HI+ +++K   R    ++
Sbjct: 202 NNAPALVIDAKFPLEAWNAIKADETPETKRAAVQQFRRDMEVHIRDVAEKYLIRG---ET 258

Query: 351 LDYVLMFIPIEPAFLLALEHDPSLVNFALEQNIMLVSPTNLLVALRTINNIWRYEYQNQH 410
            D   +F+P E  F    +H   LV  A    +++VSP+ L+++++ I ++ + +   + 
Sbjct: 259 QDTAFIFVPSESIFADIHQHFEYLVQRAHRARVVIVSPSLLMLSVQVIQSVLKDQRMREQ 318

Query: 411 AQTIAKQAGRIYD 423
           A  I  +   + D
Sbjct: 319 AHLIQGEVALLMD 331