Pairwise Alignments

Query, 287 a.a., hypothetical thioredoxin-like protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 293 a.a., FIG000875: Thioredoxin domain-containing protein EC-YbbN from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  219 bits (557), Expect = 7e-62
 Identities = 117/287 (40%), Positives = 177/287 (61%), Gaps = 5/287 (1%)

Query: 1   MDNILDLTKDNIQQVVDASMQQLVVMVFWAQPQPQSVAMVQTLEQLATQHAGRFVLAKVN 60
           + NI+++ + N+QQ ++ SM   V+  FW++     + +   LE LA Q+ G+F+LAK++
Sbjct: 12  VQNIVNINESNLQQTLEQSMTTPVLFYFWSERSQHCLQLTPVLESLAAQYHGQFILAKLD 71

Query: 61  CEAELEIANYFRIQALPTTLVLDKGQPIDGFAGLQEAVQVSAMLEKHLPPLWQLQLEQAK 120
           C+AE  IA  F ++A+PT  +   GQP+DGF G Q    + A+L+K LP   +L+ +QA 
Sbjct: 72  CDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQQAM 131

Query: 121 ALLALTQVSAEDLTTAAVLLKDAYSASNHAAEVSLVLADVYLMQGELAQAQGLLEQIGLA 180
            L+        +   A  LLKDA+  S+  +E+ L+LA+  +      +A+ +L+ I L 
Sbjct: 132 QLM-----QEGNYIDALPLLKDAWQLSSQNSEIGLLLAEAQIALNRSEEAEAVLKTIPLQ 186

Query: 181 DQDGYYQSLRAKLTLALDAADTPEIRELQQKFEQNPHDLVLLLELCKALHSAHRDEEALT 240
           DQD  YQ L A++ L   AADTPEI++LQQ+   NP D  L  +L   LH   R+EEAL 
Sbjct: 187 DQDTRYQGLVAQIELLKQAADTPEIQQLQQQVADNPQDAALATQLALQLHQVGRNEEALE 246

Query: 241 HLYGVLSKDLSAENGKVKQTFMEILTALGQGNSLANQYRRKLYTLLY 287
            L+  L KDL+A  G+ ++TF EIL ALG G++LA++YRR+LY LLY
Sbjct: 247 LLFSHLRKDLTAAEGQTRKTFQEILAALGTGDALASKYRRQLYALLY 293