Pairwise Alignments

Query, 287 a.a., hypothetical thioredoxin-like protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 284 a.a., putative thioredoxin-like protein (VIMSS) from Escherichia coli BW25113

 Score =  228 bits (581), Expect = 1e-64
 Identities = 121/287 (42%), Positives = 181/287 (63%), Gaps = 5/287 (1%)

Query: 1   MDNILDLTKDNIQQVVDASMQQLVVMVFWAQPQPQSVAMVQTLEQLATQHAGRFVLAKVN 60
           ++NI+++ + N+QQV++ SM   V+  FW++     + +   LE LA Q+ G+F+LAK++
Sbjct: 3   VENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLD 62

Query: 61  CEAELEIANYFRIQALPTTLVLDKGQPIDGFAGLQEAVQVSAMLEKHLPPLWQLQLEQAK 120
           C+AE  IA  F ++A+PT  +   GQP+DGF G Q    + A+L+K LP   +L+ +QA 
Sbjct: 63  CDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQQAM 122

Query: 121 ALLALTQVSAEDLTTAAVLLKDAYSASNHAAEVSLVLADVYLMQGELAQAQGLLEQIGLA 180
            L+        + T A  LLKDA+  SN   E+ L+LA+  +       A+ +L+ I L 
Sbjct: 123 QLM-----QESNYTDALPLLKDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLKTIPLQ 177

Query: 181 DQDGYYQSLRAKLTLALDAADTPEIRELQQKFEQNPHDLVLLLELCKALHSAHRDEEALT 240
           DQD  YQ L A++ L   AADTPEI++LQQ+  +NP D  L  +L   LH   R+EEAL 
Sbjct: 178 DQDTRYQGLVAQIELLKQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALE 237

Query: 241 HLYGVLSKDLSAENGKVKQTFMEILTALGQGNSLANQYRRKLYTLLY 287
            L+G L KDL+A +G+ ++TF EIL ALG G++LA++YRR+LY LLY
Sbjct: 238 LLFGHLRKDLTAADGQTRKTFQEILAALGTGDALASKYRRQLYALLY 284