Pairwise Alignments

Query, 287 a.a., hypothetical thioredoxin-like protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 286 a.a., co-chaperone YbbN from Dickeya dianthicola 67-19

 Score =  219 bits (559), Expect = 4e-62
 Identities = 117/285 (41%), Positives = 178/285 (62%), Gaps = 5/285 (1%)

Query: 3   NILDLTKDNIQQVVDASMQQLVVMVFWAQPQPQSVAMVQTLEQLATQHAGRFVLAKVNCE 62
           N++D+ + N+ QV++ SM   V+  FW++  P    +   L +LA ++AG+F+LAKV+C+
Sbjct: 7   NVIDINETNLHQVLEQSMSAPVLFYFWSERSPHCQQLEPVLNKLAAEYAGQFILAKVDCD 66

Query: 63  AELEIANYFRIQALPTTLVLDKGQPIDGFAGLQEAVQVSAMLEKHLPPLWQLQLEQAKAL 122
           AE  +A  F ++A+PT  +   GQP+DGF G Q    +  +L++ LP    L+L QA+ L
Sbjct: 67  AEQRVAAQFGLRAIPTVYLFKDGQPVDGFQGPQPEEVIRDLLQRVLPKAEDLKLAQAQQL 126

Query: 123 LALTQVSAEDLTTAAVLLKDAYSASNHAAEVSLVLADVYLMQGELAQAQGLLEQIGLADQ 182
           +   Q     L  AAVLLKDA+   +  ++++L+LADV +       AQ +L+ I L DQ
Sbjct: 127 IQENQ-----LKEAAVLLKDAWQLDDKRSDIALLLADVQIQLNRTDDAQTVLDTIPLQDQ 181

Query: 183 DGYYQSLRAKLTLALDAADTPEIRELQQKFEQNPHDLVLLLELCKALHSAHRDEEALTHL 242
           D  Y  L A++ L   AADTPEI++LQQ+   +P +  L ++L   LH   R+EEAL  L
Sbjct: 182 DTRYHGLVAQIELMKQAADTPEIQQLQQQLAASPDNEELAVQLSLQLHQVGRNEEALELL 241

Query: 243 YGVLSKDLSAENGKVKQTFMEILTALGQGNSLANQYRRKLYTLLY 287
            G+L KDL+A  G  ++T M+I+ ALG G++LA  YRR+LY+LLY
Sbjct: 242 MGMLKKDLTAAGGNARKTLMDIMAALGTGDALAAHYRRQLYSLLY 286