Pairwise Alignments

Query, 287 a.a., hypothetical thioredoxin-like protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 322 a.a., thioredoxin from Agrobacterium fabrum C58

 Score = 80.9 bits (198), Expect = 3e-20
 Identities = 68/278 (24%), Positives = 121/278 (43%), Gaps = 3/278 (1%)

Query: 13  QQVVDASMQQLVVMVFWAQPQPQSVAMVQTLEQLATQHAGRFVLAKVNCEAELEIANYFR 72
           + V++ S +Q V++ FWA        +   LE++  +  GR  L K+N +    I     
Sbjct: 44  KDVLEESRRQPVLVDFWAPWCGPCKQLTPVLEKVINEANGRVKLVKMNIDDHPSIPGQLG 103

Query: 73  IQALPTTLVLDKGQPIDGFAGLQEAVQVSAMLEKHL-PPLWQLQLEQAKALLALTQVSAE 131
           IQ++P  +    G+P+DGF G     Q+   ++K   P     + E   AL    Q+ A+
Sbjct: 104 IQSIPAIVAFADGRPVDGFMGAVPESQIRQFIDKIAGPDAGDPKAEIEAALSEAKQLLAD 163

Query: 132 -DLTTAAVLLKDAYSASNHAAEVSLVLADVYLMQGELAQAQGLLEQI-GLADQDGYYQSL 189
            D   AA L      A          +A+  +  G+  +A  LL  +    + D   Q +
Sbjct: 164 GDFNGAAQLFGAVMQADPENPAAIAGIAECMIAAGQYERASELLSSLPAELNDDAGIQLV 223

Query: 190 RAKLTLALDAADTPEIRELQQKFEQNPHDLVLLLELCKALHSAHRDEEALTHLYGVLSKD 249
             K+    +A    +   L++   QNP      ++L K L++  R +EA  HL  V+ KD
Sbjct: 224 SKKIAQYEEARKIGDPVALERDLAQNPDHHEARVKLAKVLNAQGRRDEAADHLLYVMRKD 283

Query: 250 LSAENGKVKQTFMEILTALGQGNSLANQYRRKLYTLLY 287
            + ++   ++  +E   + G  +  +   RRKL  +L+
Sbjct: 284 RTFDDDGARRQLLEFFESWGFKDPASIAGRRKLSAILF 321