Pairwise Alignments

Query, 315 a.a., NifR3/Smm1 family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 323 a.a., tRNA-dihydrouridine synthase C from Pseudomonas putida KT2440

 Score =  303 bits (777), Expect = 3e-87
 Identities = 152/311 (48%), Positives = 206/311 (66%), Gaps = 5/311 (1%)

Query: 1   MRVILAPMEGVVDDLMRDILSSINPYDLLVTEFVRVVDQLLPEKVFLKLCPELLSGGYTP 60
           M++ LAPMEG+VD+++RD+L+ +   D  VTEF+RV D+LLP   F KL PEL  G  T 
Sbjct: 1   MQIALAPMEGLVDNILRDVLTRVGGIDWCVTEFIRVCDRLLPASSFDKLAPELRQGARTA 60

Query: 61  SGTPVRVQLLGQEPNCMAENAMRAIELGSHGVDANFGCPAKMVNRSNGGAVLLQYPNTIH 120
           +G P+RVQLLG +P C+AENA  A ELG+  +D NFGCPAK VN+S GGAVLL+ P  +H
Sbjct: 61  AGVPMRVQLLGSDPVCLAENAALACELGAPVIDLNFGCPAKTVNKSRGGAVLLKEPELLH 120

Query: 121 DIVRAMRQAVPAEHPVTAKIRLGYEDKSLFMENALAVYEAGATELAIHARSKVDGYKPPA 180
            IVR +R+AVPA  PVT+K+RLG++     +E A A+ E G+  L +HAR+KV+GYKPPA
Sbjct: 121 AIVREVRRAVPANIPVTSKMRLGFDSPDGALECATALAEGGSAHLVVHARTKVEGYKPPA 180

Query: 181 YWEYITEVRERLPIPVIANGEIWNRDDAKRCMQVTGCDSIMIGRGAISLPNLADTIKTGA 240
           +WE++  V++ + +PV ANGEIW  DD +RC +V+G + IM+GRG +S P+L   I    
Sbjct: 181 HWEWVARVQDVVKVPVFANGEIWTVDDWRRCREVSGAEDIMLGRGLVSRPDLGLQIAAAR 240

Query: 241 -----TPYSWADTLQLMLSYTQRELSGRKSDYYPARIKQWFSYLNRQYPEADTLFRELRI 295
                 P SW D L L+  + ++  +     Y P R+KQW + L R YPEA  LF ELR 
Sbjct: 241 DGRDYQPMSWHDLLPLLREFWRQAQAKLSPRYAPGRMKQWLAMLTRSYPEAVVLFAELRR 300

Query: 296 YKTTEEIVRVL 306
                 I R+L
Sbjct: 301 EDDCARISRLL 311