Pairwise Alignments

Query, 315 a.a., NifR3/Smm1 family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 321 a.a., tRNA dihydrouridine synthase DusB from Dickeya dianthicola ME23

 Score =  103 bits (258), Expect = 4e-27
 Identities = 61/165 (36%), Positives = 93/165 (56%), Gaps = 3/165 (1%)

Query: 67  VQLLGQEPNCMAENAMRAIELGSHGVDANFGCPAKMVNRSNGGAVLLQYPNTIHDIVRAM 126
           VQ+ G +P+ MA  A    E G+  +D N GCPAK VNR   G+ LLQYP+ +  I+ A+
Sbjct: 69  VQIAGGDPDEMAAAARINAENGAQVIDINMGCPAKKVNRKMAGSALLQYPDLVKQILTAV 128

Query: 127 RQAVPAEHPVTAKIRLGY-EDKSLFMENALAVYEAGATELAIHARSKVDGYKPPAYWEYI 185
            ++V  + PVT KIR G+  +     E A    + G   L +H R++   +   A ++ I
Sbjct: 129 VKSV--DVPVTLKIRTGWAPEHRNCAEIAQLAEDCGIQALTVHGRTRACLFNGEAEYDSI 186

Query: 186 TEVRERLPIPVIANGEIWNRDDAKRCMQVTGCDSIMIGRGAISLP 230
             V++ + IP+IANG+I +   A+  +  TG D++MIGR A   P
Sbjct: 187 RTVKQNVSIPIIANGDITDPRKARAVLDYTGADALMIGRAAQGRP 231