Pairwise Alignments

Query, 243 a.a., cobB protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 255 a.a., NAD-dependent protein deacetylase of SIR2 family from Pseudomonas sp. S08-1

 Score = 92.4 bits (228), Expect = 8e-24
 Identities = 79/244 (32%), Positives = 120/244 (49%), Gaps = 22/244 (9%)

Query: 3   QHIVVLTGAGISAESGLRTFRDQDGLWEEHHIEDVATPEGYAKDAELVERFYNSRWEQL- 61
           + I+++TGAG+SA+SGL T+R   GL+     E +  P   A    +++R     W+ L 
Sbjct: 16  ERILIITGAGLSADSGLPTYRGLGGLYNGLTAEGL--PIEAALSGPMLQRDPALCWKYLA 73

Query: 62  ----HCGTVMPNAAHLALAKLEAEFSGQLLVVTQNIDDLHERAGS--RRLLHMHGELSKG 115
                C    PNA H+A+A+L+    G   V+TQNID  H + GS   RL+ +HGEL+  
Sbjct: 74  QLGEACLAASPNAGHVAIAELQRRKPG-CWVLTQNIDGYHRQPGSPLERLIEIHGELAPL 132

Query: 116 RCPR-----SRQTFLLREPFGVNNGCTCCIPAQRLRPHVVWFGEM--PLGMDRIHDAL-D 167
            C             L +P      C  C     LRP VV F EM     + R++D +  
Sbjct: 133 FCQSCGAEDPELAAHLEKPLPPR--CAQC--GGILRPPVVLFEEMLPEDAIGRLYDQVRQ 188

Query: 168 NCDLFIAIGTSGTVYPAAGFVDTANHHGAQTVEVNLQSPDRHSQFQYHLTGRAGELVPKL 227
             ++ IA+GT+ +       +  A  +G  TVE+N Q  D       HL+GRA +++P+L
Sbjct: 189 GFEVVIAVGTTASFPYIVEPLVEARRNGGFTVEINPQQTDISRWVDAHLSGRASDVLPEL 248

Query: 228 VDTI 231
           +  I
Sbjct: 249 LSHI 252