Pairwise Alignments

Query, 243 a.a., cobB protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 236 a.a., NAD-dependent deacylase from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  228 bits (581), Expect = 8e-65
 Identities = 125/237 (52%), Positives = 151/237 (63%), Gaps = 10/237 (4%)

Query: 2   YQHIVVLTGAGISAESGLRTFRDQDGLWEEHHIEDVATPEGYAKDAELVERFYNSRWEQL 61
           + ++VVLTGAGISAESG+ TFR  DGLW  H +EDVATPEGYA D  LV+ FYN R  QL
Sbjct: 3   HTNLVVLTGAGISAESGVPTFRASDGLWCGHRVEDVATPEGYAVDPALVQDFYNQRRRQL 62

Query: 62  HCGTVMPNAAHLALAKLEAEFSGQLLVVTQNIDDLHERAGSR-------RLLHMHGELSK 114
               V PNAAH ALA L A + G  L+VTQN+DDLH+RA  +        L+HMHGEL K
Sbjct: 63  --ADVRPNAAHRALADLAARWEGDFLLVTQNVDDLHDRAHEQTPPAAGFELIHMHGELLK 120

Query: 115 GRCPRSRQTFLLREPFGVNNGCTCCIPAQRLRPHVVWFGEMPLGMDRIHDALDNCDLFIA 174
           GRC RS            +       P   +RPH+VWFGEMPL M+RI  AL+ CDLF++
Sbjct: 121 GRCTRSGVVMGWAGDMAADQASPHH-PEGVMRPHIVWFGEMPLQMERIERALEACDLFVS 179

Query: 175 IGTSGTVYPAAGFVDTANHHGAQTVEVNLQSPDRHSQFQYHLTGRAGELVPKLVDTI 231
           IGTSG VYPAAGFV  A + GA+TVE+NL+       F   + G A + VP   DT+
Sbjct: 180 IGTSGAVYPAAGFVQAARYAGARTVEINLEPTSVARLFDEGVYGPATQAVPAFFDTL 236