Pairwise Alignments

Query, 293 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 293 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  166 bits (419), Expect = 8e-46
 Identities = 91/288 (31%), Positives = 158/288 (54%), Gaps = 4/288 (1%)

Query: 1   MDIRQLKHLDALAITGSFTAAAKKLNMAQPALSQSIKRLELSLGVTLINRTSNKHDKHLA 60
           M+++ L+    +   GSFT AA+ L++AQPALS ++ RLE  LGVTL NRT+ K    + 
Sbjct: 1   MNLKALRCCVEIVRQGSFTKAAQHLHIAQPALSMAVTRLEEELGVTLFNRTTRK----VI 56

Query: 61  LTAEGLVLHQHATLILKQIKQAEAQIRAMANLTSGEVRIAVPGMLGSFYLPSRLMAFRHQ 120
           LTAEG          L+++  A  ++R MA+L  GEVR+ +P M G  Y+P  + AFR  
Sbjct: 57  LTAEGEQFLPRIASALREMDVARQELRDMADLKRGEVRLGIPPMFGLHYVPGLMNAFRKS 116

Query: 121 YPELKLSLFEGGTRDALRMLQQEEVDIAIITAQDLQPDFDSQLLIREQMVIAMGAEHPLA 180
           YP + +++FEG   D    L+Q E+D+A++ ++ + PD +S LL  ++M+  M  +HP A
Sbjct: 117 YPGIAMTVFEGSAEDIGHRLEQREIDLALLESRRVPPDKESILLGSDEMLACMHPDHPYA 176

Query: 181 ELPAVSLNDFFDHELVMFKTGYFHREWILSQAKDLGKKPNIAFETNLINLIKQIVSQGFG 240
               ++  D  + ++V+F   +  R  + +   + G    +A ++N ++L+ Q      G
Sbjct: 177 GKAYLTAEDLRNTDMVVFDRTFVQRHLLDAFFAEHGITYQVALQSNFVSLVVQAALDNMG 236

Query: 241 ITSVLEMAISPKDDILAKPFDPPVFLNLHIAWKKQRPVSQADRAFVEF 288
           + ++L         I+  PF P   ++  + W+    +S A + F++F
Sbjct: 237 VATLLRSVQQRTPGIVGVPFRPAQQMSFRLCWRSGEYLSLASKRFIDF 284