Pairwise Alignments

Query, 389 a.a., isovaleryl-CoA dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 382 a.a., Acyl-CoA dehydrogenase from Variovorax sp. SCN45

 Score =  237 bits (605), Expect = 4e-67
 Identities = 133/373 (35%), Positives = 211/373 (56%), Gaps = 4/373 (1%)

Query: 14  EDVDMLRDAVHDFAQHEIAPIAAKVDHDNAFPNEIWPVLGGMGLLGVTVPEEYGGANMGY 73
           ED+++ RD V  F + E+ P   +        +E+W   G +GLL   +PE YGGA   +
Sbjct: 12  EDLELYRDNVVRFIETEVLPHDEEARKRGHVGHEVWRKAGALGLLCADIPEAYGGAGGDF 71

Query: 74  LAHVVAMEEISRASASIGLSYGAHSNLCVNQINRNGNAAQKAKYLPKLVSGEHIGALAMS 133
               V  EE+SR + + G++   H+ +    +N +G   QK +YLP++  GE +GA+AM+
Sbjct: 72  RHEAVFYEEMSRRALT-GMATSVHAIVAHYFLN-HGTEEQKLRYLPRMARGEMVGAIAMT 129

Query: 134 EPNAGSDVVSMKLHARKEGDRYILNGNKMWITNGPDANTYVIYAKTDLTKGAHGITAFIV 193
           EP AGSD+  ++  A K    Y++NG+K +ITNG  A   ++ AKTD  +GA G +  IV
Sbjct: 130 EPGAGSDLQGVRTRAEKADGGYVINGSKTFITNGYLAGVVLVVAKTDPAQGAKGTSILIV 189

Query: 194 E-RGFKGFSQAQKLDKLGMRGSNTCELVFEDVEVPEENILGGLNN-GVKVLMSGLDYERV 251
           E  G +GF   + LDK+GM+  +T EL F+DV VP + +LGG+   G   LMS L YER 
Sbjct: 190 ETEGCEGFRVGRVLDKIGMKAQDTSELFFDDVRVPADALLGGVEGQGFFQLMSDLPYERT 249

Query: 252 VLSGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAAKAYVYSVAK 311
           ++    L  M    +  + Y+ +R+ FGK + EFQ  + KLA++ T +   +A++    +
Sbjct: 250 IIGLSALATMEGAYETTLDYVRDRKAFGKPVAEFQNTKFKLAEIATQIKVGRAFIDRCVE 309

Query: 312 SCDRGETTRKDAAGAILYSAELATKMALDAIQLLGGNGYVNEYATGRLLRDAKLYEIGAG 371
               G+     A+ A L+ +E   ++  + +QL GG G++NEY   R+  DA++  I  G
Sbjct: 310 DLVAGKLDTATASMAKLWGSEAQGRVIDECLQLFGGYGFMNEYMVARMYADARVQRIYGG 369

Query: 372 TSEIRRMLIGREL 384
           T+EI + +I R L
Sbjct: 370 TNEIMKEVISRAL 382