Pairwise Alignments

Query, 389 a.a., isovaleryl-CoA dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 375 a.a., short-chain acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  276 bits (705), Expect = 9e-79
 Identities = 142/373 (38%), Positives = 226/373 (60%)

Query: 12  LGEDVDMLRDAVHDFAQHEIAPIAAKVDHDNAFPNEIWPVLGGMGLLGVTVPEEYGGANM 71
           + ++   + DAV  FAQ  + P A + D D+ FP E    +  +GL G+ VPE++GG++ 
Sbjct: 3   VNDEQQQIADAVRAFAQERLKPFAEQWDKDHRFPKEAIDEMAELGLFGMLVPEQWGGSDT 62

Query: 72  GYLAHVVAMEEISRASASIGLSYGAHSNLCVNQINRNGNAAQKAKYLPKLVSGEHIGALA 131
           GY+A+ +A+EEI+    +       H+++    I R GN  QK ++L  L +G  +GA A
Sbjct: 63  GYVAYAMALEEIAAGDGACSTIMSVHNSVGCVPILRFGNEQQKEQFLTPLATGAMLGAFA 122

Query: 132 MSEPNAGSDVVSMKLHARKEGDRYILNGNKMWITNGPDANTYVIYAKTDLTKGAHGITAF 191
           ++EP AGSD  S+K  AR EGD Y+LNG+K +IT+G +A   +++A TD   G  GI+AF
Sbjct: 123 LTEPQAGSDASSLKTRARLEGDHYVLNGSKQFITSGQNAGVVIVFAVTDPEAGKRGISAF 182

Query: 192 IVERGFKGFSQAQKLDKLGMRGSNTCELVFEDVEVPEENILGGLNNGVKVLMSGLDYERV 251
           IV     G+  A+  DKLG   S+TC++VF++V+VP  N LG    G K+ ++ L+  R+
Sbjct: 183 IVPTDSPGYQVARVEDKLGQHASDTCQIVFDNVQVPVANRLGAEGEGYKIALANLEGGRI 242

Query: 252 VLSGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAAKAYVYSVAK 311
            ++   +G+  A  ++   Y +ER+ FGK + E Q V  +LADM T ++ A+  V   A 
Sbjct: 243 GIASQAVGMARAAFEVARDYANERQSFGKPLIEHQAVAFRLADMATKISVARQMVLHAAA 302

Query: 312 SCDRGETTRKDAAGAILYSAELATKMALDAIQLLGGNGYVNEYATGRLLRDAKLYEIGAG 371
             D G     +A+ A L+++E+A K+  DA+Q LGG GY++++   R+ RD ++ +I  G
Sbjct: 303 LRDAGRPALVEASMAKLFASEMAEKVCSDALQTLGGYGYLSDFPLERIYRDVRVCQIYEG 362

Query: 372 TSEIRRMLIGREL 384
           TS+I+RM+I R L
Sbjct: 363 TSDIQRMVIARNL 375