Pairwise Alignments

Query, 535 a.a., 3-methylcrotonyl CoA carboxylase, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 535 a.a., methylcrotonyl-CoA carboxylase biotin-containing subunit beta from Pseudomonas putida KT2440

 Score =  789 bits (2038), Expect = 0.0
 Identities = 391/536 (72%), Positives = 450/536 (83%), Gaps = 2/536 (0%)

Query: 1   MTQLSSRINARSDEFKAKSDDMAALVADLKTKLAKIELGGGPVALERHLSRGKRLPRQRV 60
           M  L ++IN RS EF   S  M   V  L+  LA++  GGGP A ERH SRGK LPR+R+
Sbjct: 1   MATLHTQINPRSAEFAVNSAAMLEQVQALRGLLAQVAQGGGPKAQERHTSRGKLLPRERI 60

Query: 61  EKLLDAGSPFLELSQFAAFEVYDEEVPAAGIIAGIGRVSGVECMIIANDATVKGGTYYPI 120
           ++LLD GSPFLE+ Q AA EVY E+VPAAG+IAGIGRV GVECMI+ANDATVKGG+YYP+
Sbjct: 61  DRLLDPGSPFLEIGQLAAHEVYGEDVPAAGVIAGIGRVEGVECMIVANDATVKGGSYYPL 120

Query: 121 TVKKHIRAQEIASRCHLPCIYLVDSGGANLPRQDEVFPDRDHFGRIFYNQAQMSAKGIPQ 180
           TVKKH+RAQ IA +  LPCIYLVDSGGANLPRQDEVFPDR+HFGRIF+NQA MSA+GIPQ
Sbjct: 121 TVKKHLRAQTIALQNRLPCIYLVDSGGANLPRQDEVFPDREHFGRIFFNQANMSAQGIPQ 180

Query: 181 IAVVMGLCTAGGAYVPAMADESIIVKDQGTIFLAGPPLVKAATGEEVSAEELGGADVHTK 240
           IAVVMG CTAGGAYVPAMADE+I+V+ Q TIFLAGPPLVKAATGE VSAE+LGGADVH +
Sbjct: 181 IAVVMGSCTAGGAYVPAMADEAIMVRQQATIFLAGPPLVKAATGEVVSAEDLGGADVHCR 240

Query: 241 ISGVADHLAQNDEHALELARRAVSRLNHQKEITL-RLSPVKPPKFDISELYGIVGTDLKK 299
            SGVADH A NDEHAL +ARR+V+ LN  K   L RL+PV P  +   ELYG+V  D K+
Sbjct: 241 TSGVADHYADNDEHALAIARRSVANLNWHKLGKLQRLAPVAP-LYAADELYGVVPADAKQ 299

Query: 300 PFDVKEVIARIVDDSDFDEFKANYGATLVCGFARIHGYPVGIVANNGILFSESAQKGAHF 359
           PFDV+EVIAR+VD S FDEFKA +G TLVCGFA +HGYPV I+ANNGILF+E+AQKGAHF
Sbjct: 300 PFDVREVIARLVDGSVFDEFKALFGTTLVCGFAHLHGYPVAILANNGILFAEAAQKGAHF 359

Query: 360 IELCCQRKIPLLFLQNITGFMVGKKYEHEGIAKHGAKMVTAVSCANVPKFTVIIGGSYGA 419
           IEL CQR IPLLFLQNITGFMVGKKYE  GIAKHGAK+VTAV+CA VPKFTVIIGGS+GA
Sbjct: 360 IELACQRGIPLLFLQNITGFMVGKKYEEGGIAKHGAKLVTAVACAQVPKFTVIIGGSFGA 419

Query: 420 GNYGMCGRAFEPTMMWMWPNARISVMGGEQAAGVLATVRRDGLARKGEEWSAEDEKAFKA 479
           GNYGMCGRA++P  +WMWPNARI VMG EQAAGVLA V+R+   R G+ +SAEDE   K 
Sbjct: 420 GNYGMCGRAYDPRFLWMWPNARIGVMGAEQAAGVLAQVKREQSERSGQPFSAEDEARLKQ 479

Query: 480 PIIAQYDKEGHPYHASARLWDDGIIDPAQTRDVVGLALSAALNAPIEDTRFGVFRM 535
           PI+ QY+++GHPY++SARLWDDG+IDPAQTRDV+GLALSAALNAPIE +RFG+FRM
Sbjct: 480 PILDQYERQGHPYYSSARLWDDGVIDPAQTRDVLGLALSAALNAPIEQSRFGIFRM 535