Pairwise Alignments

Query, 577 a.a., hypothetical ATP-dependent protease (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 812 a.a., ATP-dependent protease-like protein from Pseudomonas putida KT2440

 Score =  291 bits (746), Expect = 5e-83
 Identities = 183/475 (38%), Positives = 271/475 (57%), Gaps = 23/475 (4%)

Query: 107 IAEKHVSYRYLSGNIRRSDLLGRMVQSGNSSKYQAGALAECHYVFICAESLWKREGLWDL 166
           + E H +Y  L G I  S   G +  S    +  A   A   ++ + AE +     +WD 
Sbjct: 321 VFEPHPTYDNLFGRIEYSTDQGALYTSYRQLRPGALHRANGGFLILEAEKMLGEPFVWDA 380

Query: 167 LMQILTQKEYQISH-----------NLSP--IPLNCKIILIGAGLIYSQIRSEDWQFQRH 213
           L + L  ++ ++             +L P  IPLN K+++IG+  +Y  ++  D  FQ  
Sbjct: 381 LKRALQSRKLKMESPIGELGRVATVSLQPQVIPLNVKLVIIGSRQLYYALQDHDPDFQEM 440

Query: 214 FNLLAELAGELDLTRFKEAQYASWLQTVAQNVD-ATLEQSSLAPLFRHSARLTEHQRRLS 272
           F +L +   ++ +      Q+A  L+T       A L   ++A L  +SARL E+Q RLS
Sbjct: 441 FRVLVDFDEDMPMVDENLEQFAQLLRTRTNEEGMAPLTSDAVARLATYSARLAENQSRLS 500

Query: 273 LSMLDLAQLMAQAKVYRGKST---INAASIERALSQANYRHNSSEEFSGQSFDD---NFI 326
             + DL QL+++A   R  ++    +A  IERAL     R   +   S +  DD     I
Sbjct: 501 ARIGDLFQLVSEADFIRQLASDEMTDAGHIERALKAKATR---TGRVSQRVLDDMLAGII 557

Query: 327 NLPTEGAMVGQINGLTVIDAIDHCYGEPARITATVHYGDGEVADIERKSELGGNIHAKGM 386
            + TEGA +G+ NGLTV++  D  +G PARI+ATV+ G   + DIER+  LG  IH+KG+
Sbjct: 558 LIDTEGAAIGKCNGLTVLEVGDSAFGMPARISATVYPGGSGIVDIEREVNLGQPIHSKGV 617

Query: 387 MILSACLYRIFGRDAPLHLNANIVFEQSYQEIDGDSASLAEYCCLMSAIAEQPIIQSLAI 446
           MIL+  L   + ++ PL ++A+I  EQSY  +DGDSASL E C L+SA++  P+ Q  AI
Sbjct: 618 MILTGYLGSRYAQEFPLAISASIALEQSYGYVDGDSASLGEACTLISALSRTPLKQCFAI 677

Query: 447 TGALDQFGNVQAIGGINEKIEGFFNLCERRGLTGKQGVIMPKSNMLQLNLHSKVITAVGK 506
           TG+++QFG VQA+GG+NEKIEGFF LCE RGLTG+QGVI+P++N+  L L  +V+ AV  
Sbjct: 678 TGSINQFGEVQAVGGVNEKIEGFFRLCEARGLTGEQGVIIPRANVATLMLDERVLQAVEN 737

Query: 507 GLFHIYAIEHMDEAVELLMQMPAGVADEDNDFPAESLYGLVQQRLDKLAGNGEEE 561
           G+FH+YA+   DEA+ LL+   AGV D+   F   S+   V +RL ++A    EE
Sbjct: 738 GMFHVYAVSQADEALSLLVGEEAGVLDDKGLFTEGSVNARVVERLREIAEMISEE 792