Pairwise Alignments

Query, 640 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 639 a.a., ABC transporter ATPase from Pseudomonas simiae WCS417

 Score =  618 bits (1594), Expect = 0.0
 Identities = 328/647 (50%), Positives = 442/647 (68%), Gaps = 17/647 (2%)

Query: 1   MSLVRINNGSLAYGYTPLLQNADFTIERGERVCIVGRNGAGKSSLLKILSGDVLLDEGEF 60
           M+L++ ++ SLA+G  PLL    + I RGERVCI+GRNG GKSS++K++ GD   D+G  
Sbjct: 1   MTLLKFSDVSLAFGAMPLLDKVSWQIARGERVCIIGRNGTGKSSMMKLVKGDQKPDDGSV 60

Query: 61  NIDGSVTVSRLQQDPPKAEQGTVYAYIAAGLKEVGEALEQYHQLSHDVAFAEPEQMERML 120
                + +  L Q+ P A+  TV+  +A GL  VG  L +YH L+ +         E  L
Sbjct: 61  WRAPGLKIGELPQELPVADGRTVFDVVAEGLDGVGALLAEYHHLAQNCV------TEDDL 114

Query: 121 NQMQKLQETLDHHNGWQLDSRINQNCELLGLDPDKSLSELSGGWQRKVALARALVSAPDL 180
           N++  +Q+ L+  +GW+L   ++     L L  DK+L+ELSGGW+R+V LA+ALVS PDL
Sbjct: 115 NKLMHVQQDLEARDGWRLQQLVDSTLSRLQLPADKTLAELSGGWRRRVLLAQALVSEPDL 174

Query: 181 LLLDEPTNHLDIDTIEWLEKFLLDFQGAIVFISHDRGFIARMATRIVDLDRGVVTSWPGN 240
           LLLDEPTNHLDI  I WLE+ L +FQGA++FI+HDR F+  +ATRI++LDRG +  W G+
Sbjct: 175 LLLDEPTNHLDIGAIAWLEEALKEFQGAVLFITHDRSFLQNLATRILELDRGGLIDWNGD 234

Query: 241 YQAYLDGKQEWLRVEAEKNALFDKRLADEEVWIRQGVKARRTRNEGRVRALKALRQERSE 300
           Y ++L  K+  L  E   NALFDK+LA EEVWIRQG+KARRTRNEGRVRALKALR ERSE
Sbjct: 235 YASFLVHKEAALAAEETANALFDKKLAQEEVWIRQGIKARRTRNEGRVRALKALRVERSE 294

Query: 301 RLNRQGNAKMAVADTERSGKLVFDVKDLNYNLPDKN-LVKNFNTTVLRGDRIALIGPNGC 359
           R  R G A + +   ++SGK V  +++++++ PD   L+K+F+  + RGDRI L+G NG 
Sbjct: 295 RRERTGKANIQLDTADKSGKQVMVLENVSFHHPDGPFLIKDFSMVLQRGDRIGLLGANGT 354

Query: 360 GKSTLIKLLIEKLQPQSGEVKVGTKLEIAYFDQYREALDPEQTVEDNVGEGKKTITINGQ 419
           GK+TL+KL++  LQP SG V+ GT++++AYFDQ R  LD E+TV DNV EG+  I I+GQ
Sbjct: 355 GKTTLLKLMLSGLQPTSGTVEEGTRIDVAYFDQLRHQLDLEKTVIDNVAEGRDFIDIDGQ 414

Query: 420 DRHILSYLQDFLFSPMRARTPVKALSGGEKNRLLLAKLLIRPANLIILDEPTNDLDIETL 479
            RH+LSYL DFLFSP RARTPVKALSGGE+ RLLLAKL  +PANL++LDEPTNDLD+ETL
Sbjct: 415 SRHVLSYLGDFLFSPQRARTPVKALSGGERARLLLAKLFSKPANLLVLDEPTNDLDVETL 474

Query: 480 ELLESLLTEYEGTLLLVSHDRAFIDNTVTSSWWYAGNGHWTEYVGGYQDAIDQG------ 533
           ELLE +L  + GT+L+VSHDRAF+DN VTS+  + G G   EYVGGYQD + QG      
Sbjct: 475 ELLEEVLLTFNGTVLMVSHDRAFLDNVVTSTLVFEGEGKVREYVGGYQDWLRQGGSPRLL 534

Query: 534 --AKFYSEEPSQTNTVEAPATAKTAEVKVAEPAKAAKKLSYKFQRELEAMPELMEKLEAE 591
              +  S +    + V AP  A T  V+ A   K  KKLSYK QRELEA+P  ++  E +
Sbjct: 535 GVTESKSGKADLNSAVVAPVAAATPVVESAPVGK--KKLSYKLQRELEALPGDIDAKEQQ 592

Query: 592 ILELQTTVASPDFYSQTQDKINQVLSLLADKEKQLEVCFERWEELES 638
           I  ++  +A   FY +   +  +V++ L    ++LEV  ERW EL++
Sbjct: 593 IAAVEAEMADAGFYLRPAAETAKVIASLEKLNQELEVLVERWAELDA 639