Pairwise Alignments

Query, 640 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 641 a.a., ATP-binding cassette domain-containing protein from Paraburkholderia sabiae LMG 24235

 Score =  575 bits (1481), Expect = e-168
 Identities = 307/642 (47%), Positives = 421/642 (65%), Gaps = 4/642 (0%)

Query: 1   MSLVRINNGSLAYGYTPLLQNADFTIERGERVCIVGRNGAGKSSLLKILSGDVLLDEGEF 60
           MSL  I    LA+G+  LL +ADF++E GERV ++GRNGAGKSSLLKI++     D+G  
Sbjct: 1   MSLYTITGAQLAFGHVALLDHADFSLEAGERVGLIGRNGAGKSSLLKIVAELAKPDDGLI 60

Query: 61  NIDGSVTVSRLQQDPPKAEQGTVYAYIAAGLKEVGEALEQYHQLSHDVAFA-EPEQMERM 119
                +    + Q+P      +V+  +AAGL      L++Y+ ++H++A   E  Q + +
Sbjct: 61  TRQQELVTVYVPQEPEFDGDVSVFDTVAAGLTRASALLDEYNTVAHELAETPEGAQHDAL 120

Query: 120 LNQMQKLQETLDHHNGWQLDSRINQNCELLGLDPDKSLSELSGGWQRKVALARALVSAPD 179
           L +M  LQ +LD  + W   +R+      +GLD D  +  LSGG Q++VALARALV  PD
Sbjct: 121 LARMNVLQSSLDATDAWNWRTRVATTLAQIGLDGDARVGSLSGGMQKRVALARALVVQPD 180

Query: 180 LLLLDEPTNHLDIDTIEWLEKFLLDFQGAIVFISHDRGFIARMATRIVDLDRGVVTSWPG 239
           +LLLDEPTNHLD D I WLE+ L+  +  ++FI+HDR F+ R+ATRIV+LDRG + S+PG
Sbjct: 181 VLLLDEPTNHLDFDGIRWLEELLVSQRAGLLFITHDRAFLDRVATRIVELDRGRLLSYPG 240

Query: 240 NYQAYLDGKQEWLRVEAEKNALFDKRLADEEVWIRQGVKARRTRNEGRVRALKALRQERS 299
           N+ AY   K + L VE  +N  FDK LA EEVWIR+GV+ARRTR+ GR+  L  +R ER+
Sbjct: 241 NFSAYQTRKAQQLEVERVENEKFDKLLAQEEVWIRKGVEARRTRSVGRIARLVQMRNERA 300

Query: 300 ERLNRQGNAKMAVADTERSGKLVFDVKDLNYNLPDKNLVKNFNTTVLRGDRIALIGPNGC 359
           ER N QGN K+ V   E+SGK+V ++ D+     ++ +V  F  TV+RGD+I  IGPNG 
Sbjct: 301 ERRNVQGNVKLDVGQGEKSGKIVAELTDVTKRYGERTVVDRFTATVMRGDKIGFIGPNGA 360

Query: 360 GKSTLIKLLIEKLQPQSGEVKVGTKLEIAYFDQYREALDPEQTVEDNVGEGKKTITINGQ 419
           GK+TL+KL++ +LQP  G V+VGT L++AYFDQ R  LD E+++ D +  G   + INGQ
Sbjct: 361 GKTTLLKLILGELQPDEGNVRVGTNLQVAYFDQMRAQLDLEKSLADTISPGSDWVEINGQ 420

Query: 420 DRHILSYLQDFLFSPMRARTPVKALSGGEKNRLLLAKLLIRPANLIILDEPTNDLDIETL 479
            +H++SYL DFLF+P RAR+PVK+LSGGE+NRLLLA+L  RPAN+++LDEPTNDLDI TL
Sbjct: 421 KKHVMSYLGDFLFAPERARSPVKSLSGGERNRLLLARLFARPANVLVLDEPTNDLDIPTL 480

Query: 480 ELLESLLTEYEGTLLLVSHDRAFIDNTVTSSWWYAGNGHWTEYVGGYQDAIDQGAKFYSE 539
           ELLE LLT+Y+GT+LLVSHDRAF+DN VTS     G G W EYVGG+ D   Q  +  SE
Sbjct: 481 ELLEELLTDYDGTVLLVSHDRAFLDNVVTSVIASEGGGKWREYVGGFTDW--QIQRDRSE 538

Query: 540 EPSQTNT-VEAPATAKTAEVKVAEPAKAAKKLSYKFQRELEAMPELMEKLEAEILELQTT 598
           + +Q +   E P  A   +      A+   KLS+K QRELEA+P  +  LEAE   +   
Sbjct: 539 QIAQQDAPKEQPKEAAPKDSAAGRNAQRTVKLSFKEQRELEALPGQIAALEAEQKAIGAQ 598

Query: 599 VASPDFYSQTQDKINQVLSLLADKEKQLEVCFERWEELESLK 640
           +     + +   +  ++    A  + +L V  ERW+ELES K
Sbjct: 599 IEEGSIFVKDAQEGARLTERYAAIDDELLVAIERWDELESKK 640