Pairwise Alignments

Query, 640 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 634 a.a., ABC transporter ATP-binding protein from Serratia liquefaciens MT49

 Score =  719 bits (1857), Expect = 0.0
 Identities = 369/640 (57%), Positives = 463/640 (72%), Gaps = 8/640 (1%)

Query: 1   MSLVRINNGSLAYGYTPLLQNADFTIERGERVCIVGRNGAGKSSLLKILSGDVLLDEGEF 60
           MSL+ ++   L++   PLL N +  IE  ERVC+VGRNGAGKS+LLKIL  ++ LD+G  
Sbjct: 1   MSLISMSGAWLSFSDAPLLDNTEIHIEDNERVCLVGRNGAGKSTLLKILGKEIPLDDGRV 60

Query: 61  NIDGSVTVSRLQQDPPKAEQGTVYAYIAAGLKEVGEALEQYHQLSHDVAFAEPEQMERML 120
             +  + V+RLQQDPP+   GTV+ ++A G+ E  E L+ YH +SH V   E +  E+ L
Sbjct: 61  IYEQDLIVARLQQDPPRNIGGTVFDFVAEGVAEQAEHLKAYHAISHLV---ETDPSEKNL 117

Query: 121 NQMQKLQETLDHHNGWQLDSRINQNCELLGLDPDKSLSELSGGWQRKVALARALVSAPDL 180
            +M ++ E LDH   WQLDSRI++    LGL+ D  LS LSGGW RK AL RALVS+P +
Sbjct: 118 TRMAQIMEILDHQGLWQLDSRISEVLLQLGLNGDAELSSLSGGWLRKAALGRALVSSPRV 177

Query: 181 LLLDEPTNHLDIDTIEWLEKFLLDFQGAIVFISHDRGFIARMATRIVDLDRGVVTSWPGN 240
           LLLDEPTNHLDI TI+WLE FL +FQG+IVFISHDR FI  MATRIVDLDRG + SWPGN
Sbjct: 178 LLLDEPTNHLDITTIDWLEGFLKEFQGSIVFISHDRSFIRNMATRIVDLDRGKLVSWPGN 237

Query: 241 YQAYLDGKQEWLRVEAEKNALFDKRLADEEVWIRQGVKARRTRNEGRVRALKALRQERSE 300
           Y  YL  K+E LRVE  +NA FD++LA EEVWIRQG+KARRTRNEGRVRALKALR ERSE
Sbjct: 238 YDLYLLSKEEALRVEELQNAEFDRKLAQEEVWIRQGIKARRTRNEGRVRALKALRNERSE 297

Query: 301 RLNRQGNAKMAVADTERSGKLVFDVKDLNYNLPDKNLVKNFNTTVLRGDRIALIGPNGCG 360
           R    G AKM V +  RSGK+VF+++D+NY +  K LV+NF+  V RGD+IAL+GPNGCG
Sbjct: 298 RREVMGTAKMQVEEAVRSGKIVFEMEDVNYQVGGKVLVRNFSAQVQRGDKIALVGPNGCG 357

Query: 361 KSTLIKLLIEKLQPQSGEVKVGTKLEIAYFDQYREALDPEQTVEDNVGEGKKTITINGQD 420
           K+TL+KL++ +L+  SG V  GTKLE+AYFDQ+R  LDPE+TV DN+ EGK+ + +NG+ 
Sbjct: 358 KTTLLKLMLGQLKADSGRVHCGTKLEVAYFDQHRAELDPERTVMDNLAEGKQEVMVNGRS 417

Query: 421 RHILSYLQDFLFSPMRARTPVKALSGGEKNRLLLAKLLIRPANLIILDEPTNDLDIETLE 480
           RH+L YLQDFLF P RA TPVKALSGGE+NRLLLAKL ++P+NL+ILDEPTNDLD+ETLE
Sbjct: 418 RHVLGYLQDFLFHPKRAMTPVKALSGGERNRLLLAKLFLKPSNLLILDEPTNDLDVETLE 477

Query: 481 LLESLLTEYEGTLLLVSHDRAFIDNTVTSSWWYAGNGHWTEYVGGYQDAIDQGAKFYSEE 540
           LLE L+  Y+GT+LLVSHDR F+DN+VT  W + GNG  + +VGGY DA  Q A      
Sbjct: 478 LLEELIDGYQGTVLLVSHDRQFVDNSVTECWIFEGNGEISTFVGGYYDAHHQRA-----T 532

Query: 541 PSQTNTVEAPATAKTAEVKVAEPAKAAKKLSYKFQRELEAMPELMEKLEAEILELQTTVA 600
                 V A      AE K  +P K A KLSY   RELE +P+ +E+LEAEI  LQ  ++
Sbjct: 533 AKPIRQVAAEQNKPAAEKKAEQPKKPAAKLSYNLLRELEQLPQRLEQLEAEIEALQAQMS 592

Query: 601 SPDFYSQTQDKINQVLSLLADKEKQLEVCFERWEELESLK 640
             DF+++   +  QVL+ LA  E  LE  F RWEELE++K
Sbjct: 593 DADFFTRPHSETQQVLTALAAAEGALEEAFARWEELEAMK 632