Pairwise Alignments

Query, 640 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 644 a.a., ABC transporter ATP-binding protein from Dickeya dadantii 3937

 Score =  718 bits (1853), Expect = 0.0
 Identities = 372/648 (57%), Positives = 463/648 (71%), Gaps = 14/648 (2%)

Query: 1   MSLVRINNGSLAYGYTPLLQNADFTIERGERVCIVGRNGAGKSSLLKILSGDVLLDEGEF 60
           MSL+ ++   L++   PLL N +  IE  ERVC+VGRNGAGKS+LLKIL+ ++ LD+G  
Sbjct: 1   MSLISLSGAWLSFSDAPLLDNTELHIEDNERVCLVGRNGAGKSTLLKILAKEIPLDDGRL 60

Query: 61  NIDGSVTVSRLQQDPPKAEQGTVYAYIAAGLKEVGEALEQYHQLSHDVAFAEPEQMERML 120
             +  + V+RLQQDPP+   GTV+ ++A G+    E L+ YH     V     +  E+ L
Sbjct: 61  VYEQDLIVARLQQDPPRDVAGTVFDFVAEGVAAQAEYLKAYHVALRLVG---EDPSEKNL 117

Query: 121 NQMQKLQETLDHHNGWQLDSRINQNCELLGLDPDKSLSELSGGWQRKVALARALVSAPDL 180
           NQ+ K+QE LDH   W+L+ RIN+  E LGL  D  LS LSGGW RK AL RALVSAP +
Sbjct: 118 NQLAKVQEVLDHQGLWKLEDRINEVLEQLGLSADTPLSALSGGWLRKAALGRALVSAPRV 177

Query: 181 LLLDEPTNHLDIDTIEWLEKFLLDFQGAIVFISHDRGFIARMATRIVDLDRGVVTSWPGN 240
           LLLDEPTNHLDIDTI+WLE FL  F G+IVFISHDR FI  MATRIVDLDRG + SWPG+
Sbjct: 178 LLLDEPTNHLDIDTIDWLEGFLKTFSGSIVFISHDRSFIRNMATRIVDLDRGKMVSWPGD 237

Query: 241 YQAYLDGKQEWLRVEAEKNALFDKRLADEEVWIRQGVKARRTRNEGRVRALKALRQERSE 300
           Y  YL GK+E LRVE  +NA FD++LA EEVWIRQG+KARRTRNEGRVRALK +RQER+E
Sbjct: 238 YDKYLLGKEEALRVEELQNAEFDRKLAQEEVWIRQGIKARRTRNEGRVRALKTMRQERAE 297

Query: 301 RLNRQGNAKMAVADTERSGKLVFDVKDLNYNLPDKNLVKNFNTTVLRGDRIALIGPNGCG 360
           R    GNAKM V +  RSGK+VF+++D++Y +  K LV  F+  V RGD+IAL+GPNGCG
Sbjct: 298 RREVMGNAKMQVEEASRSGKIVFELEDVDYQVDGKTLVSGFSAQVQRGDKIALVGPNGCG 357

Query: 361 KSTLIKLLIEKLQPQSGEVKVGTKLEIAYFDQYREALDPEQTVEDNVGEGKKTITINGQD 420
           K+TL+KL++ +L P SG +  GTKLE+AYFDQ+R  LDPE+TV DN+ EGK+ + +NG+ 
Sbjct: 358 KTTLLKLMLGQLAPTSGRIHCGTKLEVAYFDQHRAELDPERTVMDNLAEGKQEVMVNGRP 417

Query: 421 RHILSYLQDFLFSPMRARTPVKALSGGEKNRLLLAKLLIRPANLIILDEPTNDLDIETLE 480
           RH+L YLQDFLF P RA TPVKALSGGE+NRLLLA+L ++P+NL+ILDEPTNDLD+ETLE
Sbjct: 418 RHVLGYLQDFLFHPKRAMTPVKALSGGERNRLLLARLFLKPSNLLILDEPTNDLDVETLE 477

Query: 481 LLESLLTEYEGTLLLVSHDRAFIDNTVTSSWWYAGNGHWTEYVGGYQDAIDQGAKFYSEE 540
           LLE LL  Y+GT+LLVSHDR F+DN+VT  W + GNG    YVGGY DA  Q A   S  
Sbjct: 478 LLEELLESYQGTVLLVSHDRQFVDNSVTECWIFEGNGLIGRYVGGYYDAQQQRA---SAA 534

Query: 541 PSQTNTVEAPATAK-------TAEVKVAEPAK-AAKKLSYKFQRELEAMPELMEKLEAEI 592
           P +T+     A AK             A+PAK    KLSY  QRELE +P+ +E LE EI
Sbjct: 535 PLRTSLPVKSAPAKENRDSENAQSAPAAQPAKRGGGKLSYNQQRELEQLPQRIEVLENEI 594

Query: 593 LELQTTVASPDFYSQTQDKINQVLSLLADKEKQLEVCFERWEELESLK 640
             LQ  +  P F+S+  D+   VL+ LAD E+QLE CFERWE LE+ K
Sbjct: 595 ENLQQQMNDPAFFSRPHDETQPVLTALADAEQQLETCFERWETLEAQK 642