Pairwise Alignments

Query, 640 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 636 a.a., ATPase components of ABC transporters with duplicated ATPase domains from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  350 bits (897), Expect = e-100
 Identities = 212/642 (33%), Positives = 343/642 (53%), Gaps = 16/642 (2%)

Query: 1   MSLVRINNGSLAYGYTPLLQNADFTIERGERVCIVGRNGAGKSSLLKILSGDVLLDEGEF 60
           M+ + +   S ++G  PL     F I++G+++ +VG NGAGKS+L+KI+ G  + DEGE 
Sbjct: 3   MNYLSVEKLSKSFGDKPLFHQISFGIDQGQKIALVGINGAGKSTLMKIIMGMEIPDEGEV 62

Query: 61  NIDGSVTVSRLQQDPPKAEQGTVYAYIAA-GLKEVGEALEQYHQLSHDVAFAEPEQMERM 119
            I+  +  + + Q+P      T+Y  + +    E  +A+E Y +     A    E  +  
Sbjct: 63  AINQGIKTAYVHQNPVFEANLTIYQTLFSDSSSEPLKAIEAYQK-----AMLAAESGKDN 117

Query: 120 LNQMQKLQETLDHHNGWQLDSRINQNCELLGL-DPDKSLSELSGGWQRKVALARALVSAP 178
            +++  + E +D    W  + +I +    LGL D D  +  LSGG +++VALA+A++  P
Sbjct: 118 ADELNGIMEKMDRLQAWDFEYQIKEVLGKLGLHDTDLPVGNLSGGQRKRVALAKAILEKP 177

Query: 179 DLLLLDEPTNHLDIDTIEWLEKFLLDFQGAIVFISHDRGFIARMATRIVDLDRGVVTSWP 238
           DLLLLDEPTNHLD+ TIEWLE +L     ++  ++HDR F+ ++   I++LD G +  + 
Sbjct: 178 DLLLLDEPTNHLDLKTIEWLEDYLSKANLSLFMVTHDRYFLEKVTNEILELDAGKIYRYT 237

Query: 239 GNYQAYLDGKQEWLRVEAEKNALFDKRLADEEVWIRQGVKARRTRNEGRVRALKALRQER 298
           GNY  +LD K E   VEA +          E  WIR+  KAR T+ + RV A +A +++ 
Sbjct: 238 GNYSYFLDKKAERREVEASEQEKAKSLYKKELEWIRRQPKARGTKAKYRVDAFEATKEKA 297

Query: 299 SERLNRQGNAKMAVADTERSGKLVFDVKDLNYNLPDKNLVKNFNTTVLRGDRIALIGPNG 358
            +R   +  A    A  +R G  + +++ L     DK +V +F+ T  +GD+I ++GPNG
Sbjct: 298 FQRKEEREVALQVSA--KRLGGKIIELEKLFKRYGDKRIVSDFSYTFKKGDKIGIVGPNG 355

Query: 359 CGKSTLIKLLIEKLQPQSGEVKVGTKLEIAYFDQYREALDPEQTVEDNVGEGKKTITI-N 417
            GK+T + +L   L+P SG++ +G      Y+ Q   + D  + + D V E  + +T+ N
Sbjct: 356 AGKTTFLNMLTGTLKPDSGDITIGQTTAFGYYRQEEHSFDESKRLIDLVKEVAEVVTLSN 415

Query: 418 GQDRHILSYLQDFLFSPMRARTPVKALSGGEKNRLLLAKLLIRPANLIILDEPTNDLDIE 477
           G       +L  F F P +  TP+  LSGGEK RL L  +LI+  N +ILDEPTNDLDI 
Sbjct: 416 GSTITASQFLNQFGFPPKQQHTPISKLSGGEKRRLQLLMVLIKTPNFLILDEPTNDLDIV 475

Query: 478 TLELLESLLTEYEGTLLLVSHDRAFIDNTVTSSWWYAGNGHWTEYVGGYQDAIDQGAKFY 537
           TL  LE  L  + G +++VSHDR F+D  V   + + G G   ++ G Y D  +   +  
Sbjct: 476 TLNTLEDFLEYFPGCMIIVSHDRYFMDRLVDHIFVFQGGGQIKDFPGNYSDLREWEKE-- 533

Query: 538 SEEPSQTNTVEAPATAKTAEVKVAEPAKAAKKLSYKFQRELEAMPELMEKLEAEILELQT 597
            EE           T  +     +E AK + K S+K ++E +A+ E + +LE   LE  +
Sbjct: 534 -EEAKAAADKSVTKTQPSVHEGASEKAKKSSKASFKQKQEFKAVQEKINQLE---LEKGS 589

Query: 598 TVASPDFYSQTQDKINQVLSLLADKEKQLEVCFERWEELESL 639
            +   +  ++  + + +  + +   ++QLE    RW EL  L
Sbjct: 590 LIEKINEGTEDHELLLEWSTAIQGIDEQLEELEFRWLELSEL 631