Pairwise Alignments

Query, 640 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 605 a.a., ABC-F family ATP-binding cassette domain-containing protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  371 bits (952), Expect = e-107
 Identities = 234/643 (36%), Positives = 337/643 (52%), Gaps = 54/643 (8%)

Query: 3   LVRINNGSLAYGYTPLLQNADFTIERGERVCIVGRNGAGKSSLLKILSGDVLLDEGEFNI 62
           LV + +  L  G  PL    D  +E   R  +VGRNGAGKS+L+K++ G +  D G+ +I
Sbjct: 7   LVALKDVRLQDGQRPLFDGVDLAVEPRSRAALVGRNGAGKSTLMKVVMGLIEPDSGDRSI 66

Query: 63  DGSVTVSRLQQDPPKAEQGTVYAYIAAGLKEVGEALEQYHQLSHDVAFAEPEQMERMLNQ 122
             +V  + + Q+P    + T+  Y ++G  E                             
Sbjct: 67  QSAVRFAYVPQEPVITGE-TLLDYASSGEAET---------------------------- 97

Query: 123 MQKLQETLDHHNGWQLDSRINQNCELLGLDPDKSLSELSGGWQRKVALARALVSAPDLLL 182
                        W  +S +    E  GL+P KS   LSGG  R+ ALA+A    PDLLL
Sbjct: 98  -------------WTAESWL----ETFGLNPAKSTQGLSGGETRRAALAKAFAEEPDLLL 140

Query: 183 LDEPTNHLDIDTIEWLEKFLLDFQGAIVFISHDRGFIARMATRIVDLDRGVVTSWPGNYQ 242
           LDEPTNHLDI  IE LE  L+  + A++ +SHDR F+ R+   +  L+   V +    + 
Sbjct: 141 LDEPTNHLDILAIELLENELIQARFALLVVSHDRAFLNRVTNTVHWLEGRRVRTLNKGFV 200

Query: 243 AYLDGKQEWLRVEAEKNALFDKRLADEEVWIRQGVKARRTRNEGRVRALKALRQERSERL 302
            + +   + L  EAE      K +  E       + ARR+RNEGR R+L+ALR ER+E++
Sbjct: 201 EFDEWSSKVLEEEAESLRRLTKTIERETATFYSSITARRSRNEGRARSLQALRAERAEKM 260

Query: 303 -NRQGNAKMAVADTERSGKLVFDVKDLNYNLPDKNLVKNFNTTVLRGDRIALIGPNGCGK 361
            N      + V     SGKLV ++K ++     + L K+  T ++RGDR+ ++GPNG GK
Sbjct: 261 KNVPRELYLGVDSGSTSGKLVAEIKHVSKGFNGRTLFKDLTTRIIRGDRLGIVGPNGAGK 320

Query: 362 STLIKLLIEKLQPQSGEVKVGTKLEIAYFDQYREALDPEQTVEDNVGEGK-KTITINGQD 420
           +TL+K L+ +L P  G V++G  LE  Y DQ RE L  + T+ D +  G   +I + G  
Sbjct: 321 TTLVKTLLGELAPDEGTVRMGANLEPVYLDQSREGLKSDMTLWDALTPGGGDSILVRGVS 380

Query: 421 RHILSYLQDFLFSPMRARTPVKALSGGEKNRLLLAKLLIRPANLIILDEPTNDLDIETLE 480
           +H+ +Y +DFLFS  + R P+  LSGGE+NRLLLA+ L +PAN++ILDEPTNDLD++TL+
Sbjct: 381 KHVAAYAKDFLFSEAQLRQPISTLSGGERNRLLLARALAKPANMLILDEPTNDLDMDTLD 440

Query: 481 LLESLLTEYEGTLLLVSHDRAFIDNTVTSSWWYAGNGHWTEYVGGYQDAIDQGAKFYSEE 540
            LE LL  Y+GTL+LVSHDR FID   TS+    G G   E  GG+ D I Q   F   +
Sbjct: 441 KLEELLEGYDGTLILVSHDRDFIDRLSTSTLALNGRGDIVETPGGWTDFIRQNPGFL--Q 498

Query: 541 PSQTNTVEAPATAKTAEVKVAEPAKAAK---KLSYKFQRELEAMPELMEKLEAEILELQT 597
           P      +  A A+ A  +   PA A K   KLS+K    L+ +  L++ L A I +   
Sbjct: 499 PGSNPRPQDKAAAQRA-AEAPPPAVAPKKTAKLSFKDAHRLKELEALIDALPATIAKHDA 557

Query: 598 TVASPDFYSQTQDKINQVLSLLADKEKQLEVCFERWEELESLK 640
           T+A P  Y++     +  +        +LE     W ELE  K
Sbjct: 558 TLADPGLYARDPKAFDAAMKAAEKARAELESAELEWLELEEKK 600