Pairwise Alignments

Query, 711 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 403 a.a., LSU m5C1962 methyltransferase RlmI from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  107 bits (268), Expect = 9e-28
 Identities = 84/275 (30%), Positives = 136/275 (49%), Gaps = 15/275 (5%)

Query: 391 EGVDIADIAPAFANRIKKNAKQFEKW-AQKEGIDSYRLYDADIPEY-NVAVDKYLDYVVV 448
           E +DIA     F  R  + A+Q+  W A+K+G+DSYRL   +      V +D++  ++V+
Sbjct: 79  ESIDIA-----FFTRRLRQAQQWRDWLAKKDGLDSYRLIAGESDGLPGVTIDRFGHFLVL 133

Query: 449 QEYMAPASIPEAVTKRRLSDVLLALPAAIGVDPHKIIMKTRERQKGTNQYQKLDERKLEL 508
           Q   A A    A     +S +    P     D   + ++ +E    T      +     L
Sbjct: 134 QLLSAGAEYQRAAL---ISALQTCYPDCAIYDRSDVAVRKKEGMALTQGPVTGELPPALL 190

Query: 509 ITTEYGAKFKLNLTGYLDTGLFLDHRLTRRLVGQKSKGRRVLNLFSYTGSASVHAALGGA 568
              E+G K  +++ G   TG +LD R +R    +  + +RVLN FSYTG  +V A +GG 
Sbjct: 191 PIEEHGMKLLVDIQGGHKTGYYLDQRDSRLATRRYVENQRVLNCFSYTGGFAVSALMGGC 250

Query: 569 KSVTTVDMSNTYLAWAKENFALNNLSGKQYEFVQAD---CLQWIRDCNEQYDLIFIDPPT 625
           + V +VD S   L  A++N  LN L   + EFV+ D    L+  R+  E++D+I +DPP 
Sbjct: 251 RQVVSVDTSQDALDIARQNVELNQLDLSKAEFVRDDVFKLLRAYREHGEKFDVIIMDPPK 310

Query: 626 FSNSKRMEDSFDVQRDHVNLLGMLIKLLSPNGELV 660
           F  +K         R + ++  + I+LL+P G L+
Sbjct: 311 FVENK--SQLMGACRGYKDINMLAIQLLNPGGILL 343