Pairwise Alignments

Query, 440 a.a., ISSod7, transposase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 442 a.a., IS4 family transposase from Dickeya dianthicola ME23

 Score =  466 bits (1200), Expect = e-136
 Identities = 227/417 (54%), Positives = 296/417 (70%)

Query: 19  TCLADVLEPELIQSCLDSQGVATLRRRKLPMDAMIWAVIGMALFRGESVRSLINKLDIVL 78
           T L D L+PELI  CL   G  TLR+R+LP++ M+W ++GMAL R E +  ++N+LDI+L
Sbjct: 21  TSLGDFLDPELISRCLAESGTVTLRKRRLPLEMMVWCIVGMALERKEPLHHIVNRLDIML 80

Query: 79  PQEIDYVARSAVTQARKRLGSEVVREVFSRSANTWHARAEHPHWCGLNLYGVDGVVWRTP 138
           P    +VA SAV QAR+RLGSE VR VF+++A  WH    HPHWCGL L  VDGVVWRTP
Sbjct: 81  PGNRPFVAPSAVIQARQRLGSEAVRRVFTQTAQLWHRATPHPHWCGLTLLAVDGVVWRTP 140

Query: 139 DSVQNQAAFGRTANASGEAAYPQIRMVCLMELSSHLLVNSAFDSVVENEMNLASQLISSI 198
           D+ +N  AF R   A     YPQ++MVC MEL+SHLL  +AF ++ E+E  LA  L +  
Sbjct: 141 DTPENDVAFPRQTYAGQPGLYPQVKMVCQMELTSHLLTAAAFGTMKESEYTLAEHLTAQT 200

Query: 199 PNHSLTLFDRGFYSLGLLHAWQQAQPNSHWLLPLKKGTQYEVVRTLGKHDQWVKLTTTPQ 258
            +++LTLFD+G+YSLGLL+AW QA  + HW++PLKKG QY VVR LGK D  V L T+PQ
Sbjct: 201 GDNTLTLFDKGYYSLGLLNAWHQAGEHRHWMIPLKKGAQYNVVRKLGKGDHLVTLKTSPQ 260

Query: 259 ARKKWPQLPDTLEARLLTKTVKGKSVAILTSLTDPMRYPSEDIVDLYAHRWEIELGYREM 318
           ARKKWP+L D++ ARLLT T KGK   +LTS+TD MRYP  ++ DLY+HRWEIELGYRE+
Sbjct: 261 ARKKWPELGDSMTARLLTVTRKGKVCYLLTSMTDAMRYPGVEMADLYSHRWEIELGYREI 320

Query: 319 KQHLLESRFTLRSQLPELVFQELWGVLLAYNLIRYKMLLMAKSLPSVHPNQLSFRDAASH 378
           KQ +  SR T+RS+ PELV QELWGVLLAYNL+RY+M+ MA  L    PNQLSF +++  
Sbjct: 321 KQTMQLSRLTVRSKKPELVEQELWGVLLAYNLVRYQMIKMAGHLKGYWPNQLSFSESSGL 380

Query: 379 IIFKLTQLSSQTPGNVPRDVLDIERNARQFKLDGKRERAYPRILKMSKNKFPVRSKK 435
           ++  L  L   +PG +P  + D+E  A+  KL G+RERA+PR++K   +K+    KK
Sbjct: 381 VMRMLMTLQGASPGRIPELMRDLESLAQLVKLPGRRERAFPRVVKERPHKYGKAHKK 437