Pairwise Alignments

Query, 92 a.a., peptidyl-prolyl cis-trans isomerase C (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 445 a.a., molecular chaperone SurA from Pseudomonas simiae WCS417

 Score = 62.4 bits (150), Expect = 5e-15
 Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 10/95 (10%)

Query: 7   RHLLVS-----SEDQCQALKQQILD----GADFAQIARAHSSCPSGA-QGGELGSFGPGM 56
           RH+LV      +E Q + L Q+I D    G DFA +A++ S  P  A  GG+L    P  
Sbjct: 295 RHILVKPSEIRTEAQTKELAQKIYDRIESGEDFATLAKSFSEDPGSALNGGDLNWIDPKA 354

Query: 57  MVREFDEVVFSAPLNVVQGPVKTQFGYHLLEVTSR 91
           +V EF +V+   P  V+  P KTQ+G+H+LEV  R
Sbjct: 355 LVPEFQQVMADTPQGVLSKPFKTQYGWHVLEVLGR 389



 Score = 40.0 bits (92), Expect = 3e-08
 Identities = 20/74 (27%), Positives = 40/74 (54%)

Query: 18  QALKQQILDGADFAQIARAHSSCPSGAQGGELGSFGPGMMVREFDEVVFSAPLNVVQGPV 77
           QA+ +++  GADFAQ+A A S   +  +GG++G      +   FD  + +  +  +  P 
Sbjct: 208 QAIYERLKAGADFAQMAIAQSGSDNALEGGDMGWRKAAQLPPPFDRELSAMEVGGITQPA 267

Query: 78  KTQFGYHLLEVTSR 91
           +T  G+ +L++  +
Sbjct: 268 RTPGGFIILKLLEK 281