Pairwise Alignments

Query, 690 a.a., ATP-dependent helicase DinG (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 714 a.a., ATP-dependent DNA helicase DinG from Pseudomonas simiae WCS417

 Score =  469 bits (1208), Expect = e-136
 Identities = 280/729 (38%), Positives = 408/729 (55%), Gaps = 56/729 (7%)

Query: 1   MLPDNVKNQIRAIYKDIAASLPNFRPRREQNFMVAEISKTLAGDYDKD---RR-----II 52
           M+   +K  I+  Y     +  + +PR  Q  M+AE++K L GD D D   RR     ++
Sbjct: 1   MISTELKTTIQGAYSRFLEA-KSLKPRYGQRLMIAEVAKVL-GDIDTDDEGRREGEPAVV 58

Query: 53  VVEAGTGIGKSLSYILGTIPLALASKKKVCIATATVALQEQLLHKDLPFFLEQSGLNFRF 112
            VEAGTG GK+++Y L  IP A A+ K++ IATATVALQEQ+++KDLP  +  SGLNF F
Sbjct: 59  AVEAGTGTGKTVAYSLAAIPTAKAAGKRLVIATATVALQEQIVYKDLPDLMRNSGLNFTF 118

Query: 113 GLVKGRQRYVCLSKLAMLIGDDNSTQMAM-------WQTKPDNSQIAMLQTLLNDVNEGR 165
            L KGR RY+CLSKL +L+ + ++            ++ + D +   +  +++  +   +
Sbjct: 119 ALAKGRGRYMCLSKLDVLLQEGHAQTATAQLFEEEGFKIEVDEASQKLFTSMIEKLAGNK 178

Query: 166 WNGEIDTLSTPIPDHLWQQIACDKHSC-HRQLASHRNCPFHKAREDVDTWDVLIANHSLL 224
           W+G+ D+  T + D  W ++  D   C +R   +   C F+KARE +   DV++ NH ++
Sbjct: 179 WDGDRDSWPTALEDADWARLTTDHSQCTNRHCPNFGQCAFYKAREGMGKVDVIVTNHDMV 238

Query: 225 FADLELGGGVILPNPEDVFYVIDEAHHLPIVARDFSSAQATLRGAADWLEKVGKTSAKLQ 284
            ADL LGGG +LP+P D  YV DE HHLP  A    +    LR  ADWLE   K   KL 
Sbjct: 239 LADLALGGGAVLPDPRDTLYVFDEGHHLPDKAIGHFAHYTRLRSTADWLETTAKNLTKLL 298

Query: 285 NQIKSNNIIAPAQAMQDHIGDLIGQLNQVAHYCDTQTKQF------------------AN 326
            Q            +   +G LI Q+ ++A    TQ +QF                    
Sbjct: 299 AQ----------HPLPGDLGKLIEQVPELAREIKTQ-QQFMFSACEQVADFKPGEDVEGR 347

Query: 327 PESRYRFEHGKLPGALKIPAENLAATSNLALKQFNKMQLLLAEAIKDGD----IPKHQAE 382
              R+RF  G +P  ++     L    +     F ++  LL E + DG+    I  +QAE
Sbjct: 348 ERPRHRFVGGLIPEHMREMGIELKKGFSRLTDLFTRLTDLLKEGM-DGEVNIGIASNQAE 406

Query: 383 ALQAEMGFMLQRLENLQKLWKMMAKEDSNKGAPMARWIELI-TGKQVDYLFSASPIEVGF 441
                 G +L R +   +LW     ED     PMARW+ L  +G   D   +ASPI    
Sbjct: 407 EWYPLFGSLLSRSQGNWELWTAFTVEDPEDNPPMARWLTLSESGALFDIEVNASPILAAE 466

Query: 442 MLETMLWQKAAGVVLCSATLRALNNFDHFAHQVGLSLKDGSRYLALQSPFDYPNNATLYL 501
           ML   LW  A G ++ SATL AL  FD F  + GL  K  +    + SPF + +   L +
Sbjct: 467 MLRRNLWNVAYGCLVTSATLTALGTFDRFRMRAGLPKKAVTA--VVPSPFHHADAGVLRV 524

Query: 502 PKMKTEPTDDA-YTAELAEQILQLIEGEMATLVLFASYWQMEKVAELLEGKLALEILIQG 560
           P +K +P D A +TA +   + +L+EG   TLVLF+S  QM+ V + L+     ++ IQG
Sbjct: 525 PDLKADPRDAAAHTAAIIRDLPELVEGSRGTLVLFSSRKQMQDVFDGLDRDWRKQVFIQG 584

Query: 561 NAPRQQLLETHKAKCDKGEPSILFGTGSFSEGLDLPGDYLTNLIVTKLPFAVPTSPVEQA 620
           N  +Q+ L  HKA+ D G+ S+LFG  SF+EG+DLPG Y  ++++ K+PF+VP  PVE A
Sbjct: 585 NLSKQETLNKHKARVDGGDSSVLFGLASFAEGVDLPGAYCEHVVIAKIPFSVPDDPVEAA 644

Query: 621 HAEYVKIKGGNPFLQLTIPDASRKLIQSCGRLLRKEQDYGRVTILDRRLVTKRYGKSLLD 680
            AE+++ +GGNPF+++++PDAS KL+Q+CGRLLR E+D G +T+LDRRLVT+RYGK++L+
Sbjct: 645 LAEWIEARGGNPFMEISVPDASLKLVQACGRLLRTEEDRGTITLLDRRLVTQRYGKAILN 704

Query: 681 ALPPFRRVI 689
           ALPPFRR I
Sbjct: 705 ALPPFRREI 713